| mature miRNA: CAGAAGATAGAGAGCACA species: Bruguiera gymnorhiza database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124544556|gb|DB993439.1|DB993439 DB993439 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-15_P01 5', mR CAGAAGATAGAGAGCACA EST sequence (targeted fragment marked with yellow): CAAAAAAAAACACATAAAAAAAATAACTAAAACCAGAATGGGGGGACGCCTTACTCCTAAACCATTTCTCTCATCCACCCTATCCATCTTCATATTCAATATCATTTCTTCCCCTCCCCCCCGCTCCCATCCCCCCTTTTTTCTCTTCTCTTTCTTCCCCCCATATCTTTGTATCCCCTCTCCCTTTCTCTTTCTCTTCCCTTCCTTACCCCCGCTCCGGTTCTTCTCCTTTTCTCCTTCTCTTCTTCCTTCTCTTGCCCTCTTTCCTTCCTCTCTCTTTCTCTCCTTCGCAATTGGCGCCTTCCCCCCTCCCCCTTTTTCATTGCCCCCCTCTCTTCTCTCTCCTCCTTCTCCTTCTCCCCTCCCCGTTGCTCACTTTTCTCTCCCTTTCTCTCTTCCCTCTCTCCTCGCTCTCCCCTCCCTATTTCGACTTTCCTCTTCTCCTGTTTCTTTCTTATCTTCTCTTTCTTCTGCCTCCTCTCTTCCTCTTCTTCCCCTTTCCCTTCTCTATCCTCCCGCCCTTTTCGTTGCGTTCCTTTTTCATTCGTCTTCCATTCTTTTTTCCCTTCTCCTTGTCCCTTCTCCCCCTTAACTCTTCCTTGTCTCTACTTCGCCTTACTTTTCTCCTTTCTCTCTCCTTCCCCTTCTGTGCTTTCCCCTTTCCCTCTTCTCCTCCTTTCTCCTCCTCGCTTCTCCCTCCCTCTTTCTTTCTCTTCTGCCTATTCCCTCTCCTTTCCGCCTTTCTTCTCCTTCCTCCTCCCTTTTCTTCTCTTCCCCATCCTTTTTCCCTCCCCTTTCGTCCCCTTCTCT | |||||||||
gi|53817114|gb|BP942613.1|BP942613 BP942613 Bg02 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg02-10_M20 5', mRN CAGAAGATAGAGAGCACA EST sequence (targeted fragment marked with yellow): GACTGCTCACTGGCCTTCTGCCATTTCTTCTCTCTCTCTCTCTCTCGGATTCTGTCGACGTTCTCCTCGGCAGCCTTGTTTCTTTTTCCGTATATTATAACAATTGTGATTCTTGTACAAAACAAAAGGCTTGTTCGTCAAAGGAGACAGCTTTAACATAGAATTCAATCAAAGAGACTCAAGAAAGGAAAAATCTTTCGTTTTTTTTTGTATCACACCATTTGACATAAAGAGAAAAAAAAATGGGGTGCTCTTGTATGGGTTCTTGTTTTCTCTTGATTTTGTCTCTGCTTGCTGTTCTTGTTTCTGGGTCTGAAAGAAATTTGCCTATTATATCCTTTGAAGAAGGATACTCTCAACTTTTTGGGGATGATAATCTGGTTATCCATAAAGATGGCAAGAAAGTCCACCTGTCTCTAGATGAAAGGACAGGTCATGTTTCTCTGTTCTAGCTCTGTGATTTCTATTTTTTTGGGACCTTCTCTCTTGTGTGTGTGTGTGTGTGTGTG | |||||||||
gi|124536901|gb|DB990928.1|DB990928 DB990928 Bg01 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg01-06_M07 5', mR CAGAAGATAGAGAGCACA EST sequence (targeted fragment marked with yellow): ATATGTTGCCGAAACTTTCCTAAAAACAAAAAACTGCAAGAATCTGCGCTTTCGACCGGCCCTCGTTCTGCTCTGGGGGCTCCTTCGTGGCTGTTGCCGGTAGGCATACTTTCGGGCGCCGCGGGCTGCTCTCGTGATGCGCAGCTGCTCCCTGCTTCTCGCATCTGGCGCTTCCGACCTCTAGGCCGCTGTTCGTTTGTATCAGGCTTCTCGGCGGCTGCTGCCTCTATCGCCACCTTGAACTACGGCAGGGTCTGTTCTGGCGGCCTCCGGCTGAGTCTGGATGCTTCTTCCCATCGTCCTTCTCGGACCCGCCCTGCCTGTGGGACAGGGAGGTCCATTGCGATGGGGGGCTGTTTCTGGTCCTTGGATACCCAGCAGCCGGTTACGGATGGTGCTCCTGGTATCGGCCAGCCGCACTGCTCACGTACCGGTCCACCGATATCTTTACTGTGCGGGTGTTTCCCTGACCTTGGGGAAGGATGATGCGAACGTTGGTGACGTTAATGAGTCAGGGTCATGGAAGTTCCGTCCCTTAGCTAGAGGGTCGTCCTTGGGGGTATCTATAACTTGGCGTGTGTTTGTCGATACGCTTTCTATCTTCTGGGAAGTGGACGGGCGTGACTAAACCCCTGACTACCTTTGGCGGCGGGGAGAAAGGTTGCTTGTTGAGTTCGCGAAGCCCTTGTTCGCTCTATGTGGCGGGATTTTTGCGTTGCCTTTTTGTTTGTCGTTTCTGGCTGCCTTCGTGGGATTGGTTCCCGCCTTTGTTTTCTTGACGGGCCCCTGTTGGTCGGTTGGGCAGGCTTTTTTTTGATGTTTGGGGGTTTGAGTGTATTGGGGTTTGGTCGC | |||||||||
gi|124544066|gb|DB994983.1|DB994983 DB994983 Bg05 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg05-12_J21 5', mR CAGAAGATAGAGAGCACA EST sequence (targeted fragment marked with yellow): GACTCTCCACTTCATCCGCACCACACAAGCAAGGGGGAGGCAGCAGAGGAGAGGAGGAGAGAGATCGGAGAATGGCAGCCGCGGCCGCTTCCGCTTCGAAAATGGCATCAGCAGTAGCGGAGAAGGTGAGAACCGCAGCAGCTCGGCGGCAAGCCCTGACCTTGACGGAGGCGGCCGCCGCCTGAATCCGTCAGCTGCTCGATCAGCGTCGACGCTTCTTTCTTCGGTCTCGGTGTCGAGGCTCGCGGCTTCATGTTCTTATCTCTTCACCCTTATTTATTCAGGGGTGAAAAGAATATTTTGTATGTTGTTGTTTTGTATGTTAGGTGTTTTCAAGGTTTTTTGGGGTGGGTGCAACCCCCTTTCTGGCTGTGTTTTGTGACCTCTGTTTGGTTTTTGTTTGTTTGTTCATACCTTCCTATCTTGGTTTTTGTTTTTTATCGATCCTCCATCTCTTGTGTGTGTCCGTGTTCTTTTTTTCGTGTCTTTCCTTTTTGTTGTCCTTACTTTGTTTTTGGTTTCTGTGGGCCTGCTCGGTGTCATTTCTTTTTATTACCTGCGTGCTATCGGTTTTTTCTTCTGTGACTTTCCTTTGTCTTCTGTCTTCTGTTTTCCTTTGTCTCGCGTGCTCTGTT | |||||||||
gi|53819684|gb|BP945183.1|BP945183 BP945183 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-07_B15 5', mRN CAGAAGATAGAGAGCACA EST sequence (targeted fragment marked with yellow): GGTTTTTGAATTTTGGCTGTCTATCTTTTGCTCGGGAGGGGCAGACGACAGCGTTTTAGGCAGATGGTAAAGGCAGGGCAGAACCTACCGGCCGACGTGGCTCAGGTGATTGATCAACTGGAGCGCCATTGCTTGGCTCCCGATGGATCTTTCGTCTCCAAATCCGCCTACCTCGACCTCCAACTCGCCAGGGAGGAAATGTCGAGAGAGAGATTGCGCTACTTAGAAGCCACGGCAATATACTGTGAAGCGATGGCTATGGTGGAAGAGTATCAACAGGCGGCTTCGGTGGCTAATCTCGGCGGCGTTCGAGATCTCCAAGGAAGCTTCAAGAACTTTTCTGCTCAGGTTTATGAGATTCTGGAGCATCGCATGGTGGTTGCAGAAGCAGCTCAGAAGCTGAGACTTCCTCTCATATCCAAAGATGGGGAGATTAATGAGGAGGAGATAGAAAAATGGAGTGTGATGTCAAGAAGCTCACTTGATAGTAC | |||||||||