mature miRNA: TGACAGAAGATAGAGAGCAC species: Bruguiera gymnorhiza database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|53822678|gb|BP948177.1|BP948177 BP948177 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-21_A11 5', mRN TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): TTTGGCACTGTAAGAAGTTTCTGTTTTATTTTGGGGGTTTTGGTTAGGGTTCTAAAAAGGTCCTTCCGATCACTCCTTTTTTCAAATTTTCGCGCGAAAACAATGGATACGGAAGGGCAACGGAGCGCTTCAAATCCCTCTGCAATGCTTGCTTCTCTTTTGAGCAAAAGATCCAAGCTTCACGAAGATCTTCGAAGCATCGAAAAACAGGTCTATGATATGGAGACAAATTATTTACAGGATTCAAGCCAGTGTGGGAATGTGTTGAAAGGTTTTGAAGGGTTCCTATCTTCATCTAAGAAAACTGCCCTCTTGAAGCGATCCAGGAAGTTTCAGCCTGAAGATAGGCTGTTCTCGTTATCTTCAGTCACCTCACCTGCAGCTGAAGAACAAGCAGTTGGACGAGACGATGGGAGGTCAGACTTTGGTACAGGACGGTCTAAAGGTGGAGGCATTTATGCAAAC | |||||||||
gi|53819313|gb|BP944812.1|BP944812 BP944812 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-02_N09 5', mRN TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): GGTGGTCTATTATAGCTCAAACAAGGCCATCACCTTCGCTATACTTCCATCTTTCATCTCTGAGCTGAACTCTCTGCTGGGCTTCCCTTGTCTTCCTCAATCTTATCACCTTTTTTCTCTTTATCTTTTGTTAAACTCCTGCAAGGAGCTGTACAGTTGAGAACCCACCTCAGGAATTTTCCTTGATATAGGAGATTTTGGAGGAAATAATTGCTAGAAAAAATACAAAATAATAATAATTCAAGATGAAACACTGTGTGATTCAACAAAGCGCTTTTTCGACGCGGGAAGAGATGCCCAGATCTGCTACTGATTCCTTGTTGGGTCGCAGAGATCCGGTGGTTTGTCCCAAGCCCAGGCGCCTCGGGATCTTGAGCGCCGCCGCTGCCACCGACCTCCACCCTGCCCGCTCTCTCAGATTGCAGCCCAGCAGCCACCAGGTGGAGCATTGTGATTCAAAAG |