| mature miRNA: ATTGCATGCATGCATGCTATT species: Carica papaya database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73944443|gb|DT527751.1|DT527751 PA22 Papaya gene expression Carica papaya cDNA clone PA22 3', mRNA sequence ATTGCATGCATGCATGCTATT EST sequence (targeted fragment marked with yellow): AAAAAAAAAAATCATGCATGGCATGCATTGCATGCATCCCGGGCATTTCTCTGCATGCCATGCAAATATCCCCATGGCATGCTATGCAGTTCTGTCCTGTATAAATTAATAGCATGCATGCATGCAATATCCCGCCTCTGATTCTCCATGGGATCAAAAGCTTCGCGCCTAGTTTTCGAA | |||||||||
gi|186781549|gb|EX271354.1|EX271354 1451937_5_E15_060 PY06 Carica papaya cDNA, mRNA sequence ATTGCATGCATGCATGCTATT EST sequence (targeted fragment marked with yellow): CGGGAAATGCCCGGGGGATTCGGCCATTACGGCCGGGGAGCGGTTAGCTGCTTTTACTTCAGTCCGCTGCTCCGTTGGTGTTGCCTTGTAGATTACTGAAGTTCCAAACCGAACTGGAACTGGGTTACAGCAGAGGACTCGAAGAAGAAGATGGGGAAGCTTACCGCCGATTTGATTTGGAAATGCCCTCATTTCTTCAATGCCATTAAAGAGCGTGAATTGGATCTTCGAGGGAATAAGATCGCTGTAATTGAAAACTTGGGCGCTACTGAGGATCAATTTGATACAATTGATTTGTCTGACAACGAGATTGTCAAACTAGAAAACTTTCCTTATCTTAACCGTCTTGGTACTTTGATCATAAATAACAATCGAATTACTCGAATCAATCCCAATATTGGAGAGTTTTTGCCAAAACTACACACATTAGTTCTTACGAACAACAGGCTTGTGAATTTGGTGGAGATTGATCCTCTTGTATCCCTGCCAAAGCTGCAATTCCTTAGTCTGTTGGATAATAATGTCACAAAGAAACCAAATTATCGACTTTATGTGATACACAAGCTAAAATCACTCCGAGTTCTGGATTTTAAGAAAGTGAAGGCCAAGGAGAGAGCAGAGGCTAGAAACCTGTTCACATCTAAAGAAGCTGAGGAGGAGGCTAAGAAGCTACCGGTAAAGATATTGACAACAACTGAGGCTCCAAATGTTGCAGAAGTATCAGAGCAGCAGCAGACTCCAAAAATGGTTGCCCCCACACCGGAGCAAATTATAGCTATAAAGGCTGCGATTTTGAATTCCCAGACTCTTGAAGAGGTTGCAAGACTTGAAAAGGCGCTGAAGACTGGGCAGCTTCCTGCAGATTTGAAGATTCCTGATTATGATACTGGGGCCAAAGATGTCCCAGAAGAAGATGAAAAGATGATAGATAGTGATCAAGATAAGGCTGATAGAGAACAGAAAAATGTGGAAGAACAGAAGGATGAATCTGGACCAATGGGAACAGGTTCACTGTCTAACACAGACAAGACATGCATGCATGCAGTTAGACCACATGGAAATAAATGCATATTTCTTGGAGACTAGAAGAAGGCAAT | |||||||||