| mature miRNA: CTCGGACCAGGCTTCATTCCC species: Carica papaya database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|186828922|gb|EX262477.1|EX262477 1442640_5_B06_031 PY06 Carica papaya cDNA, mRNA sequence CTCGGACCAGGCTTCATTCCC EST sequence (targeted fragment marked with yellow): CTATGGGGGATGGTTTGTGGTTTTCTTGTTACAAGTGCTTCATCTTGAATAGAAGGCAGTGATATGCTGAAGTTCCTAAGGGTTTAGTGAGTAAATCCACGAGCTGCTCTTTTGAGTATTACGGGTAAATGAGGCATTATCTGGAAGTCTCGAATGAGGAGATCAGTGACGACCCGAGAAAAATGTAAAAGCCTGTTAGAGATTTACGAGTCATCGGGCATGATGCCTAGTCCGAGTCACAAAAGGCTTGGACTTTGAAGTCATTTCTTCTTGCAAAGAAGAGGCCTTATCCCAGATATTGCTTTAGGTATCTGACGACATGGAGCACGGCATCGAGATGCGGTTATCTAGGCTGTTGCATGAACTGACTTAAATATTGGGTAGAGTAGGATATATCGGGTCTGGTGAAGTTGAGGTAGAGCAAACATTTGATTAAACGCCTATACCTCTCCAGATCTGGTAAAATTTCTTCTTCTTCTGTATTTAATTTTAGTCCGGAAGGTAAGGGTAAATGACTTCCTTTTGCATCCTCCATTCTTGTATCCTGTAAAATATCGTTGATATATTTTCTTTTTTTGATGTAGATGCCTTCCTTCGACCTGGCTATTTCGACCGCCAAGAAAATATCGTGCTTGTCCGAGATCCTTTACTGTGAAAGCTTCATCAAGGGCATATTGAACTTTGTGGATTTCTCTTTCATTAGGACCTATAATGATGAGGTGGACATGAGGAAGGGGAGTTCGGGTGCAGTGGCTCGGTGACATGAGCAACAAAGTCTTCCATCCAGATAGGCTTGCTTCTCACATTGGTACTCCTCCTAATTTTGGGCTCTTGTGGTGTAATGTCAGTGTGGATGGTTTGAATCAAACGAATCGAGTGTATTTTCACGCAATAACGCAAACTAAGAATTCGACAAATCTTGTGAAAGAGATGATGAAAACTAAAGAGATGAGAGAGGAGAGAGAGAGAGATGATGATTTGAGAAATCGATCAGCGTCTCTTTTTTTTTTTTATTTATTCTGCCTTATTATGACAAAATATGTATTTTATTATGGGGGTGTGTAAAATAAGG | |||||||||