| mature miRNA: TCGATAAACCTCTGCATCCAG species: Carica papaya database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|186772768|gb|EX255735.1|EX255735 1435977_5_L15_054 PY06 Carica papaya cDNA, mRNA sequence TCGATAAACCTCTGCATCCAG EST sequence (targeted fragment marked with yellow): GGCGGGAATTGGCCGGGGGGATGCGGCCATTACGGCCGGGGATGGTGATCCCTGATGTGTCTGTTCCTCCATTGAACAGCATCTGAATATAGAAAGTGAAATTGTTAAGCGAAATGATCTGCCATTTGATAGAACTAAGGTCAGAATCTTGAAGTGACAAGAGGATTTCAATCACTGAAATCTCGTCTTTCAAAGAAGAACTTCTTCCCTTCAATCGAATCTCATCGATCAGATTCTGCATATATTCATCTCTCAACCTACGCATCCTTATCGCAATCTTCTCCAACCCTTTATATCCAATCAACCTCAGAAAAGGAATGAAATCACAGACACCCATTGACATGCTCGGGAAAAATCTCTCCTTGAACTCCGCCAGAAACTGGTTTTCCTTCTCCATCTCCGCCTCCTTTCCTTCAACCCCGCGCTTCCCTGCAATTATTCTCAACATGATATTCGCAATCGTGAGACAGAGCAGACGCTTCAAGTCAACCTTCTGGACGCCATTAGAGCAGATCTTGAACAGCCTGCGACAAAGGATAGCAACTTCTTCTTCTCGGACACTTGAATATTTCTGAAGACTGCTGGAAGAGAACACTTGGAGCACCGTCAGTCGGCGTAGGGTCCGCCAGAGGTCACCGTAGGGAGCGAATCCATAGACAGTGTAATTGTAACTAAGGTGATCTCCGGCGACTGATCGAGGCCTGTTGGCGAGGACGACGTCGTTTTTGGTAAAACACTCTTCGATAGCAGAGGGAGAGGAGACAACGAGGACAGGGAGAGAGCCGAAGTGAAGATAAAGAATTGGACCGTACTTGGATTTAAATGTATCCAAAGCATGGTGCAGAGGTTTGTTGATGAGATGGACGTGGCCGATGATGGGAAGAGCAGGGGGAGATGGAGGCAGACTTTGGTTTCTGCGCAGTAGAGTTTGGTTAAGAAGAAAAGGAAAGAG | |||||||||
gi|186726620|gb|EX268119.1|EX268119 1448470_5_E04_012 PY06 Carica papaya cDNA, mRNA sequence TCGATAAACCTCTGCATCCAG EST sequence (targeted fragment marked with yellow): CAAATAAAAATTCCGACGCAGCGGGAGCGGCCATTACGGCCGGGGGCAGAGGTTAATCGAAACTCAAAATTCAGAAAACCGGAACAGTCAGAAGCTGCGAAAAATGGCGGTTGGGGCGAAAATCGCACCGTCGATGTTGTCATCTGACTTCGCCAATTTGGCGTCGGAGGCCGAGCGGATGCTTAATTGTGGTGCCGATTGGCTTCATATGGACATCATGGATGGGCATTTTGTTCCAAATCTAACAATTGGTGCTCCAGTCATTGAGAGTCTGAGAAAACATACAAAGGCGTATCTAGATTGCCACCTTATGGTGACAAATCCCTTAGATTATGTTGAAGCTATGGGTAAAGCTGGTGCCTCTGGTTTTACATTTCATGTTGAGGTTTCCAAAGAAAATTGGCAAGAACTTGTTCAGAAAATTAAATTGAATGGCATGAGGCCTGGAGTGGCACTAAAGCCTGGAACACCTATTGAAGAAGTTTATCCTTTGGTTGAAGGGGAAAATCCTGTTGAGATGGTTCTTGTGATGACTGTGGAACCTGGTTTTGGTGGGCAGAAGTTCATGCCAAATATGATGGATAAGGTTCGGGCATTGAGAAGTAGGTATCCATCCCTTGATATAGAGGTGGATGGTGGTTTAGGCCCTTCAACCATTGATGTGGCTGCTTCAGCCGGAGCAAACTGTATTGTTGCTGGAAGTTCAGTGTTTGGAGCTCCAGAACCAGCACAAGTTATATCCCTTATGAGAACGAGTGTTGAGAAAGCCTCAAAGAGCAATTGATCTTGTTGCAGCAAGATATAAGAATACTGGATAAACAAAAATATTCCACAGTGTAACTATTAATCAATTTGATACCTCCAAGTTTTGAAATTAATTGAAATCATATGATTTCATAATTTTATTTATTTGTGTATTACGTTTGTATCTTCAGGGTGTATGTAAACTGTGAGCATGTACAGATGTACTAGTCAGATGACACGTGATATTTTGATCTCATTTTCTAATAAATCATATCTATGCTCATTCCCCC | |||||||||