| mature miRNA: TCGATAAACCTCTGCGTCCAG species: Carthamus tinctorius database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|125358449|gb|EL372961.1|EL372961 CFFM10181.b1_I02.ab1 CFF(LMS) safflower Carthamus tinctorius cDNA clone CFFM10181, mRNA sequ TCGATAAACCTCTGCGTCCAG EST sequence (targeted fragment marked with yellow): CTCATTCAATAAATGTCTGCACAACAACTTTCTCCCCTTCTTGTTCCTTCAAACCCCACATCATCAACCGTAACCCCAATTCCTTTTCCTCCTCAAAAACATCTTTCTTCGGCAATCCCACCTCAAATTCCAACAGATCATGGGTTCTGAGGCCTCAAAAACGACGTGTTTTGAAATTGAAGGTGGTGAGCGAGAAGGTGGTGGGAATTGATCTCGGGACGACGAATTCGGCGGTCGCGGCCATGGAAGGAGGGCAACCTACCATAATTACGAACGCCGAGGGGCAGAGGACGACGCCGTCGGTGGTGGCGTACGGTAAGAACGGCGATCGGTTGGTTGGTCAGATCGCGAAGCGGCAGGCGGTGGTGAATCCGGAGAACACGTTTTTCTCGGTGAAGAGGTTTATCGGGAGGAAGATGATGGAGGTGGATGAAGAATCGAAACAGGTTTCTTATAAGGTTGTAAGAGACGATAATGGGAATGTCAAGTTGGATTGTCCTGCTATTGGTAAACAATTTGCCCCTGAAGAGATTTCTGCACAGGTTCTTCGGAAGCTTGTGGATGATGCATCAAAGTTTTTAAGTGATAAGGTTACCAAAGCAGTGGTAACAGTGCCTGCATATTTCAATGATTCCCAAAGAACTGCAACGAAAGATGCTGGACGCATTGCGGGTATCGAAGTTCTTCGCATTATAAATGAACCAACTGCTGCTTCATTGGCTTACGGTTTTGAGAAGAAAAGCAATGAAACAATTCTGGTCTTTGATCTTGGTGGTGGTACTTTTGATGTATCAGTTCTTGAGGTTGGTGATG | |||||||||
gi|125365860|gb|EL380372.1|EL380372 CFFM1754.b1_C08.ab1 CFF(LMS) safflower Carthamus tinctorius cDNA clone CFFM1754, mRNA sequen TCGATAAACCTCTGCGTCCAG EST sequence (targeted fragment marked with yellow): CGGGCATGGAGGGTACATATCACTATAGCAAGATAGAGAGGGCCAACTGGAAAAAGGTGGCTATTCATCTTGGAAGAATTAACAATACTTTTATCAACGATATGTGTATATCAAGTGGTCAGGTCGTGTAACTACAGCTGTTACTGCTCCAAGGGTATGAAGCTAGGAAAATTGCAAAAAACAAACCAGTTATTGGAATTATTGAAGGTGAAATGATTGTCGAGGATGTACTACCAAGCGCTAATCCAAGCAAAGCCGCAGCTCCACAACCTACTGATCCAGTCACTTTAACAGCTGAAGAGAAGCTTAATGTGACACTAAAGAGAGATGGTAGTCTCAGCAACTTTGATGTGCAGGGAACTTTGTCTCTCCAAATACTTAACCTGGATGAGAGGTTTATCCAAAATTCCAAACTCAGGTTCTCATTCTACTATTCCCTTTCTTCTTCTCCACTTGCATCTTTGTGAGTTTGTGCAGTTTTTTCCTTACCACATTTCTGTTGCTGTTGTAATAAGCGCCAAAATTTGCAGTCCTGATTTATCCTTATGTAGACTTGCAATATATGTATGATCAACCACCACTGCAAATCCCAGCGACCCAGTATATGTGTTTATTTAGTGCGAATGTGAATATTGAAACTGGAAAATATGTAGTGCTATTGTTGTTTATGGTGTAACCATGGTANGTGCTTAACGTATTTATGAACAAATTTGTCGTGGATCTCCCTGGTGCAAGATTGTATGCTATTCTAATTCATTTACATCTTCAACTAAATTGATGCTTGAGTCATGGCTGCTGGAATAAGTACAATGGTAAT | |||||||||