| mature miRNA: CCATGAGGTCATGGGTTCAAG species: Centaurea maculosa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124646524|gb|EH741839.1|EH741839 CNMS16039.b1_N02.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNMS16039, mRNA CCATGAGGTCATGGGTTCAAG EST sequence (targeted fragment marked with yellow): AAATTCAACATCTCTCCCGATAGAGACTTCTACGCCTACCCACGGTTCGTGACCCACGTCGACGATAACTTCATCGCGACTCTAACCGATCTTTACCGCAAGAAACTTCGCCCGGAATTCGAAATTCTCGACCTCATGAGCTCATGGGTCAGCCATCTGCCACAAGAGGTCAAGTTCAAGAAAGTAGTTGGCCATGGGCTTAACCCACAGGAGCTAGCCAAGAACCCCAGGCTCGATTACTTTGTCGTCAAAGATCTCAACCAAGATCAAGAATTCGAGTTCGAGAACGCTAGCTTCGATGCCGTTTTATGCACGGTTAGTGTTCAATATCTCGAGCAGCCCGAGAAGGTTTTCGCGGAGGTGTTTCGGTTGTTGAGGCCCGGTGGGGTGTTTATTGTGAGCTTTAGTAACCGGTTGTTTTACGAGAAGGCGATTGGTGCGTGGAGGGAAGGGACCGGGTTCGGGAGGGTGCAGTTGGTGGTTCAGTATTTTCAATGTGTAGAAGGGTTTACTGAGCCGGAAGTGGTGCGGAAGTTAGGAGATGGTGTGAAAGTGGATGGTTCTGTTTTCGGTTGGATCAAAGGGTTGTTAGGATTCGTTTCTGGGTCGGACCCTTTTTATGCTGTCATTGCTTACAAGAATTTTAAACCCATCTATGAATGACGAAAGACTGATGTTAGATATGGAAAAAAGATTTGTAATTATAAAGTTTTAGCCCATGTGTAGCTAGGGTTGTACGTTTTGACAAGTTTTGGTGATTTTTAATTGGTACAAGT | |||||||||