| mature miRNA: GATGGCGTATGAGGAGCCAAG species: Centaurea maculosa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124617457|gb|EH715273.1|EH715273 CNML1591.b1_M13.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNML1591, mRNA s GATGGCGTATGAGGAGCCAAG EST sequence (targeted fragment marked with yellow): CGCTGGCATGCTTGCATAACTGCAAAAGCTCAGAGAAACAGGTGGGTACTGGATTGTCGAGAGGATCGAGGTAGCTGGGGTCATCATACGCCATCCAATGCTGTGCCTATGTTAATTAGAGCAGTGGCAGCTGGGGATGACGAACCACGCGTTTTAATGAACGGAACTCCAGGGAAACATCTCCCAGAGGAGTTTGTGCCAAGGTCAAAGACACAAACCCAGGGACTGTGGGCGACGCCGCATATATACGATGCAAATATGAGGTCAGCTTACTTATAAAGCTTTCAGTTGTGACAAAACATATATCTGACCAATCTCAAAACTAGCAATCATGGATCTGAGATGTGGTAGGTTTGGACGTTATTGATATTGCACAGTATAAATTTGGGGTGCATGGAAGGCAGATAACAATGGATCAGAAGTGGAATGCCTGGAGGATAAGTGATGGTCTAGTTTAAGTTTCTGTGATTTAACGTGAAAGTTTCTTCTGAGTACGAAAATTTTATTACCGATTTCAAGACACCGATCATTTGTGGAAGAGAACCCACCGCCTCTGAAGAAGATAAACATCTTGCCAATGAGCGCTCAGCAGAATTGAGTGCGACAGTGAATCAGGTTATATTGAGGAGGACTAATGCATTACTATCCAATCACTTACCACCAAAGATAGTTGAGGTGGTTTGTTGCAAGCTCACCCCTCTCCAAACAGAACTGTACAATCACTTCATTCATTCAAAAAATGAGAAAAAAGCGATTGTTGAATAAGTGAAACAGACGAAAATTCTGGCTTATATAACTGCCCTTA | |||||||||