| mature miRNA: AAATTAAGCCATGGATGGATA species: Centaurea solstitialis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124688284|gb|EH783020.1|EH783020 CNSS21864.b1_P18.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS21864 AAATTAAGCCATGGATGGATA EST sequence (targeted fragment marked with yellow): GCGGGATCGACGCCGGCGAGATTCCGAGATCCCTACCTACTTTCTTTCCCTTTTTCTCGATACATTCCGGCCGGAAAATTCTTTATCGTTTCGGAGATGGTCTCGCCGGAGAACACTAATTGGATCTACGACTACGGCTTTACTGAAGAAGCTGCAGTTCCGGTCCGTACTTGGCCTATGCAATCCGCGTTGAATAATGGTTCATCATCCAACCCTTGTGTGGAACTTGATGGCTCACTTGTGGATTCAGATGGACACAAAGAAACTGGTTCAAAAAAGCGGGGGAGGGCTGACCCTGGCAGTGGTACAAGTTCCAAAGCATGCCGAGAAAAATTGAGGAGGGATAAGCTAAATGACAAGTTTGTCGAATTGGCTTCGATCCTTGAGCCTGGGAGGCCCCCTAAAACCGATAAGGCTGCTATTTTGGTTGATGCTGTGCGGATGGTGACTCAATTACGAACCGAAGCCCAGAAGCTGAAAGCCTCGAGTTCAGATCTCCAGGAGAAAATCAAAGAGCTGAAGTCTGAAAAGAACGAACTGCGGGATGAAAAACAGAGGCTGAAAACTGAGAAAGAGAAACTCGAACAACAAGTTAACTCGATGAACATCCAACCGAGCTTCATGGGTCCACCTCCCCCTGCTGCATATCCCGTTGCAGCCGGCGGCCAAGCGATGGGCAATAAGTTGGTTCCGATTATCAGTTACCCAGGAATGGGCATGTGGCAATTCATGCCGCCTGCGGCTGTCGATACCTCGCAGGATCACATGCTTCATCCACCGGTGGCTTAATTTGGCAATTAAGCAGTTTGTTTGTCATTCCTTTATGG | |||||||||
gi|124689756|gb|EH784492.1|EH784492 CNSS23727.b1_N04.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS23727 AAATTAAGCCATGGATGGATA EST sequence (targeted fragment marked with yellow): TAGTTCTTGGTCCCCGCTGGGACCCGCGCCATGGTCCACATGTGGGCCATCACGCACGACCCGACCATATGGAAGAACCCGTGGAAGTTCAGGCCTGAACGGTTCATGGAAGAGGATGTTCCAGTCATGGGTTCGGACCTGAGGCTCGCACCGTTCGGTTCGGGTCGTAGGGTTTGCCCCGGGAAGTCACTAGGGCTAGCCACGGTTCAGTTGTGGCTAGCCCGACTTCTCCAACAGTACAAGTGGGTCCCTACGACCTCGGGTAAGCAGGTAGACCTTTCGGAGTGCCTAAAGCTCTCTCTCGAGCTCAAGACCCCACTCACTTGTCGTGCAATTGTACGATAGATCAGAAGGTACGTAACGCGTACTCATGAAAATGTTATATAATTCTACGTACTATTGTTAAGGAACTTAAAGAATTTCCTTTGAATACGTAAATAAGTTGCATGCCACTTGTGGCTCGTACGAATGTACGTAGGTTGTTTGATATCATCTCTTTCTATATATATGGTGCATATATATATGTATGTATATATATCTCAATAATTAGAAGTTGTATGTATGCATGCATGGGTTAATTTAAATAACAAGAATTGGTTCTAAGTAAAAAAAAAAAAAAAAG | |||||||||