| mature miRNA: CTTTGTCTGCATTTGCACCTG species: Centaurea solstitialis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124693649|gb|EH788385.1|EH788385 CNSS28421.b1_I01.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS28421 CTTTGTCTGCATTTGCACCTG EST sequence (targeted fragment marked with yellow): AAGAAGTTCACAAGGATACAGAAGAGAAACCAGGATGGTGCAGTGATCCCCATTTGCCTCCATGTGCAGCATTTGTAGAGATTATGGCTCCTGTTTTCTCTCGGCAAGCTTGGCGGTGTGTGTGGCATATGATTCAGAATGATTTGGTGCATGGATGGGGTTTGAATTTTGCACTTAGAAGATGTGCGAAGCCTGCTCATGAGAAAATTGGCGTCGTTGATTCACAGTGGATCATTCATCAAGTCGTCCCTTCATTGGGGAGCCAGGGTAACTCTGAGAACGGTCAAGCTCCATGGAAAGGGGTAAGAGACAGGTGTAGAAGTGAGTGGGCATTATTCCAAGATCGACTTGCAAATGCAGATAAAGCTTACTTCAAGCAAATAGGAAAAGAGGAGTGAAGTGTTAGGCAGATATGTGTACATTGGTTTGTTTCTTGACCCTTTTTGGCCTGTGACCCAGAGCCCCATTCAGGTGGCTTTTGCGTTCGCCTGCCATAGTCAGACCGACAGACAGACATACTTTGTACTCTAGCCTATAGTCATCACCATACCCATCACCATTACCATGATCAGACAGATGGAGCGAGAAAATGTCAGTTTTTGTGCATAGTTTACGTTATTAGATTCAGCAGCAGAGTGATTTCCTTTTCGTATCTNGTGTTATCCACGTATACTTGTGCTTTTTCATATGCAAGAATTCACCTTTGGTGATATCTTTGTATAATCTTTAAACATTTCTTAACTACCACGTTGTTTATTTATAGAACTATGCTGGAGTTTACAATCTA | |||||||||