| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Centaurea solstitialis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124693782|gb|EH788518.1|EH788518 CNSS28554.b1_D11.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS28554 TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): GCGGGCATCCACTTACTTGGAATCCTCAAACCCGAATGCCATTGCCCCTTCAAATGGAAGAGGACCCTGTTTATGTGAACGCAAAACAATATCATGGGATTCTGAGGCGCAGACAGTCGAGAGCTAAAGCAGAATTGGAGAAGAAAGTGATTAAATCCAGAAAGCCATACCTTCATGAATCGCGACACCAACACGCTATGAAAAGAGCTCGGGGTTGTGGGGGTCGCTTCCTCAATACGAAAAAGCTCGGTAGTGACACAACCGCAAATTCCGCAGCACAAAAGGAGACAAGATCGATGTCAACGCAATCGTTCAACTCGGGTCATCCGTCCCCCAGAGATTCAGCCATCTATGAAGATGTGCTTAAAAGAAACAGTTGCTCAAATGGGAACAACAATGATCATCAACACAGTTTATCATCAACATACAACTTCCAGTTGATGGGCAGGGAAGAGGGAGTGCATTACTTCAAAAGGGACAAGGGCAATATGGTAAATCAAGTCCCAAAAAGGGATCCATATTACAAATGAGAAAAGGGAAGAGAGAGAGTATGTTCTCAGGCAATTCATTCTTGGCTTTGGTTACTTGTGTTCTCTTTGTGGGGTAGAGATATGGAAGGCTGGAATATGGTGAGAGGCCTTATTAACCAACATATCTNACAACCCTGTTTGTGCAATATGGAGTTGTATCATCTAGTANAAAAGTAAGTTGTACATTTTGGGATGTGGAATAGATGACCTACCTCATACTTGGAAGGTGTGATATTGTGTTTGTATGAGGTAGGATTACCTT | |||||||||
gi|124691355|gb|EH786091.1|EH786091 CNSS25345.b1_A01.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS25345 TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): AGAATATTAGCATCATTTTACACATAGTAACCAAAGAGATGCCGATGGTTGCATTCTTTGTTATCTTGATTCTATCCGTTGTGGCCTCGAGAACGTATGCGGTGCAGCATATCGTTGGTGACGGTGGTGGCTGGACCAATTCCGGAGATTATACTACATGGGCTTCCAGTAAGACATTCAATGTTGGCGACACACTTTTATTCAACTATGGTGGCAGCCATGGCGTGGACGTTCTATCGAAAGCCGACTACGACAATTGTGCCACGAGCAACGCCATCAACTCCTACACTGGAGGCACAACCACCATTAAGCTCACACAAGCCGGCCCAATGTACTTTGCTTGTCCATCATTTGGGCATTGTAGTTTAGGGATGAAAATGGCAATCAATGTGGTATCTAAAGCCACCACCTCACCTACCACAACCACCCCTCCCACTAGCGACGACAACCAATCACCACCATCGTCTACCACCCCATCGTCTACCACTCCATCTACTCCGGCAACTTCAAGTCCCACCGATGAAAGCAGTGGCACGAGCATGGTGATGGTGGCTTGGTTGTCTTTGATTTTGGCACCGGTGGCTGTGTTCATGTGCTAGGAAAGAGGCAGTGCTTGTACTTATGTTTTCTTTAATTAATTGTTAAGAGTTGTGTGATTTTGTATATTTAGTTTTTGTTTGGTGGAGGTGAAATGGAAAGTAAATAAAATGGAATGTAAGTTGATGCATTGGTGAATAGAAATATAAT | |||||||||