| mature miRNA: TTTGGATTGAAGGGAGCTCTA species: Centaurea solstitialis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124689501|gb|EH784237.1|EH784237 CNSS23472.b1_O11.ab1 CNS(LMS) yellow starthistle Centaurea solstitialis cDNA clone CNSS23472 TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): ACACCAGATAGATATGGCGCTCAGTTCACTTTCATCACTACCAATCAAATCGTTAAAATTTTCACCTTCCTTCAATCCAAATCCAAATCCTCCATCCAAATCCCTAATCTGTCGATTCAATCCACAGAATAAAGATGATGATATACAACCGAAGAGATGGAAAGCTCTGGTTTCAACTGCATTGGCAGCTGCTGCCGTGATTACCTTCACCACCTCTAATAATATGTCTGCCTTGGCTGATCTTAATAAGTTCGAGGCTGATATTCGAGGTGAATTCGGCATTGGTTCAGCTGCCCAATTCGGTTCTGCTGACCTCAGGAAGGCAATTCATGTGAACGAGAATTTCAGGAGAGCAAATTTCACATCTGCTGATATGAGAGAATCAGATTTCAGTGGTTCAACATTCAATGGTGCATATCTTGAGAAAGCAGTTGCTTACAAAGCAAATTTCACAGGGGCAGATCTGAGTGATACATTGATGGATTGCATGGTCTTAAATGAAGCTAATCTCACAAATGCCATCCTTGTAAGGACAGTTCTCACTCGCAGTGATCTTGGGCGTGCAGTTATTGATGGTGCTGACTTTAGTGATGCTGTTTTGGACCTTACCCAGAAACAGGCTCTTTGCAAGTATGCAAGTGGAACAAATCCCACAACAGGGGTTAGCACAAGAACAAGCTTAGGGTGTGGAAACAGTAGACGGAATGCCTACGGTAGTCCATCTTCCCCATTGTTAAGTGCTCCACCACAGAAACTCCTAGATCGTGATGGCTTCTGCGATGATGGCACTGGACTCT | |||||||||