| mature miRNA: ACTACGTCAATAAGGCAGC species: Chlamydomonas reinhardtii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|7616010|gb|AW721450.1|AW721450 833013H12.x1 C. reinhardtii CC-125 -S, Lambda Zap II Chlamydomonas reinhardtii cDNA, mRNA sequ ACTACGTCAATAAGGCAGC EST sequence (targeted fragment marked with yellow): TTTTTTGCAGCGCCTTACAGCACCGTAACGACGATGGAACTCCAACACCACACCCACAGCCCGGCCACGATCAGTGCAAAACTGCAGCGCGGGACCAACCAAAACTGCCGGATGACCCGGCTCATTTGTCTCTGCTCTACCTCGGTACAATCCGCTCTCCGCCATTGCGAGGGGCGTGGGCTGCAGCGGGCGACCTCGGCTACTCGCCGGCGCCACGCCTTTGCCCAGGACCACCACACCCGCTCCTGGCACGCTCCCGCCTGCTCCTTGCGACCAAACAACATGGAAGCAAACCCGCTCGTCTGAACAAATCCCAGCGGCGCCGCGGCCTCACCAGTTGTATGGCCAGGACACACATCGCAACCGCCAATGTACAATCGAGTCACGACTCAAAACGCCATCCTACCAAAGCTAAACGCTTATCGCCAGCGTTGCAGGCTGCTGCGGTTTGCGCCACAAACTAGCTGGCGACCAGCAATTTCGCAGGTTTTGCGAAATGGAAAGCGAGCTGCTTAATAGACGTAGCCCTTCTCGACATGCCCTGGGCAG | |||||||||
gi|6544995|gb|AV390779.1|AV390779 AV390779 Chlamydomonas reinhardtii C9 Chlamydomonas reinhardtii cDNA clone CM060e07_r 5', mRNA ACTACGTCAATAAGGCAGC EST sequence (targeted fragment marked with yellow): GCATTTGCAGCGCCTTACAGCACCGTAACGACGATGGAACTCCAACACCACACCCACAGCCCGGCCACGATCAGTGCAAAACTGCAGCGCGGGACCAACCAAAACTGCCGGATGACCCGGCTCATTTGTCTCTGCTCTACCTCGGTACAATCCGCTCTCCGCCATTGCGAGGGGCGTGGGCTGCAGCGGGCGACCTCGGCTACTCGCCGGCGCCACGCCTTCGCCCAGGACCACCACACCCGCTCCTGGCACGCTCCCGCCTGCTCCTTGCGACCAAACAACATGGAAGCAAACCCGCTCGTCTGAACAAATCCCAGCGGCGCCGCGGCCTCACCAGTTGTATGGCCAGGACACACATCGCAACCGCCAATGTACAATCGAGTCACGACTCAAAACGCCATCCTACCAAAGCTAAACGCTTATCGCCAGCGTCGCAGGCTGCTGCGGCTTGCGCCACAGACTAGCTGGCGACCAGCAATTTCGCAGGTTTTGCGAAATGGAAAGCGAGCTGCTTAATAGACGTAGCCTTCTCGTACTGCCCTGGG | |||||||||