| mature miRNA: TGACAGAAGAGAGTGAGCAC species: Cicer arietinum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|241806950|gb|GR405095.1|GR405095 ICCV2_CAAF_W81TF ICCV2 Salinity-stressed chickpea root cDNA library Cicer arietinum cDNA clo TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTACAAATGTATCCACTCTCTTCTGTTAATGGAAAATGACATCTAGCTGAAACGAACATAATATTGACAACTAAGGCAGAAAAGGTGGAGAAAATACACAGATCAAAACCCCTAAAAACTAAAATGTCAAAAACACCCCCAGAGAAAAGATGACTCTTTAGTCTCTTTCTCGTAAAGTTAAAAAAAAAAGGGGGGAAAATGAAGATCCCTAATAAAAACCCTATGTAAAATCATTAAAATAATTAAAACTTATTGGCTTTGCGAGCCCGATGCAAACATGAGTCTACTAATGAAAGGTGATATAGCTGCAAGCAATGCCTTTGGACATTCTTCATGAGGTAAATGGCCACATCCAGATATTGCAACTAGTCTAGAATTTTCAAGTTTTGAGGCCATAGCTTGACAAGATTTTAAGGAGACAAGGGAATCTTCAGCACCTGCAATAACTAACACCGGAATGTCTTCTACAGCTAGTAGCAATGATTCTGCATTTTTCGCTGAAAGGATGGTT | |||||||||
gi|241984466|gb|GR421053.1|GR421053 ICCV2_CD44_741TF ICCV2 Salinity-stressed chickpea root cDNA library Cicer arietinum cDNA clo TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGTCCTTTAAGTATCATAAAAGTGCTACCCAAAACATTCTCTAGTTTCTTAGTTCTCAATGACCTTCAGAACGAATATATCACCATAAATCCGCCTGGGGAGGGGGCGAGAAAAATAGTACAAACGCACTTTTAAATAAAAATTAACAACATAATTGGGAGGACAGAGACTTCTTGCTACAAAAGCCTACACTTAATTAAAGCCCACTAGGGATATAAATGACTACAGAAACCCAAATGTTGCTGAACAAGTAGTAAAGTAAACATCCACTTCTAGTTTCTTCCACGTTTCTTTCCACTCTTGACCTCCCTTCCAGCCTTTGACGAACTTGGTGTCTTAACCTTCCTGTCTTCAACCTCGTTTGTTGAATCATCTGAGTTCTCATTCTCTTCTGTCTGAATTCTCCGAATCTTTGGCAAAACAAATTGCCATTAGTTTCACCTTGCCAGAT | |||||||||
gi|313087645|gb|HO062537.1|HO062537 AB1-1_8045-020_D03 Chickpea drought stressed cDNA SSH library AB1 Cicer arietinum cDNA, mRNA TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATATATGCATAACACGATATAAAAGATATTGAAAAGAAAAAGATGAAGATGGGGTGACAGATAGAAAGTGAGCACGCATAGCTTCAAGCATGAAACATCATACAAGAAAATACATGTGTGCTCACTCTCTTCTGTCACCTCCTTTTACCTTTAACCTTCATAAGAATCGATTGAGTGAATCTGATGTGTAACCTTCCTTAAGCCTGCAAATTGCATCAAACTATGCTAACCCTTCATTAATTAGTACCT | |||||||||
gi|313087635|gb|HO062527.1|HO062527 AB1-1_8044-095_G12 Chickpea drought stressed cDNA SSH library AB1 Cicer arietinum cDNA, mRNA TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AGCGGCCGCCCGGGCAGGTACTCCAAACCCTAATATTATAGTTTGTATATGAACTCAAAATTAGCTGCACAAATATGAGGATATTGCATATTTTTGCATAATAATTTTTTAATATAAACATCATCTATCGATATACCAAACAAAAACTATTGCATTTTAAACTTAAGAAGTAGCTACTAATTCATACTTGTGGAAATACGTTATGAATCTAGACACACATGTACACAAGTGCCTAATAGAGAAGCAAATCATAATTAATTTTAAATTGTGGTTGCAGATGCGTTACAGTTCCATCACAATCGTTAATAAAACAAAAATTTGTGGTGACATTAAGATAATGACGAGATTTATGGTTCCGATAAGATCACAAAGACATCAAAAACATGGTGGTGGCACCGATCGCAGACCATTTCTTAAAACCTCGCAATCGATGGACCAACATAAAAAATTTGATTTTCATGAAGCTGATCAAAGTACTGAAATATCAGATCAGGCTAAGTATCTATATATATGCATAACACGATATAAAAGATATTGAAAAGAAAAAGATGAAGATGGGGTGACAGATAGAAAGTGAGCACGCATAGCTTCAAGCATGAAACATCATACAAGAAAATACATGTGTGCTCACTCTCTACTGTCACTCTTTTACTTAACTCATAAGAATCGATTGAGTGATCTGATGTTAACCTTCTTAAGCTGCAATGCATCAACTTGCTAC | |||||||||
gi|313087509|gb|HO062401.1|HO062401 AB1-1_8043-053_E07 Chickpea drought stressed cDNA SSH library AB1 Cicer arietinum cDNA, mRNA TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATATGCATAACACGATATAAAAGATATTGAAAAGAAAAAGATGAAGATGGGGTGACAGATAGAAAGTGAGCACGCATAGCTTCAAGCATGAAACATCATACAAGAAAATACATGTGTGCTCACTCTCTTCTGTCACCTCCTTTTACCTTTAACCTTCATAAGGATCGATTGAGTGAATCTGATGTGTAACCTTCCTTAAGCCTGCAAATTGCATCAAACTATGCTAACCCTTCATTAATTAGTACCTCGGCCGCGACCACGCTAATCGAATTCCCG | |||||||||
gi|257699791|gb|GR917212.1|GR917212 CaF1_WIE_44_E_09 Early immune responsive suppression subtracted cDNA libraries of Chickpea ( TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GATTTCGAGCGGCCGCCCGGGCAGGTACCATCATTAGAGGTTAAAGACTCACGCTCTTCTAAAATTGGCGGGCAATAGTAATACACTGGAGTTCCACGTAGATGAGGTTTTCTGGCAGAGCAACAGCAACCTCCCATTTTACAAGCAGTTCTTTTCAGTTATTTGATCAATCCTGCCAGCAACATTCTCACCCTCTTCTGTTATTTAGGATCAAAAGAGGAACAGAAGCCACCAAATTTTAAGCATCAATTCTTTGCTGTGAAAAAGTGTTACAGTTGATTAGGGAAGGAGAAAGTGGGAATTAGGTTTTGCAAAAAGGGGTTGACCTCGGCCGCGACCACGCT | |||||||||
gi|241796048|gb|GR403678.1|GR403678 ICCV2_CAAF_G29TF ICCV2 Salinity-stressed chickpea root cDNA library Cicer arietinum cDNA clo TGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTACAAATGTATCCACTCTCTTCTGTTAATGGAAAATGACATCTAGCTGAAACGAACATAATATTGACAACTAAGGCAGAAAAGGTGGAGAAAATACACAGATCAAAACCCCTAAAAACTAAAATGTCAAAAACACCCCCAGAAAAAAGATGACTCTTTAGTCTCTTTCTCGTAAAGTTAAAAAAAAAAGGGGGGAAAATGAAGATCCCTAATAAAAACCCTATGTAAAATCATTAAAATAATTAAAACTTATTGGCTTTGCGAGCCCGATGCAAACATGAGTCTACTAATGAAAGGTGATATAGCTGCAAGCAATGCCTTTGGACATTCTTCATGAGGTAAATGGCCACATCCAGATATTGCAACTAGTCTAAAATTTTCAAGTTTTGAGGCCATAGCTTGACAAGATTTTAAGGAGACAAGGGAATCT | |||||||||