| mature miRNA: TGGATGCAGCGGTTCATCGAT species: Cichorium endivia database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|125346379|gb|EL360943.1|EL360943 CCEM5610.b1_C12.ab1 CCE(LMS) endive Cichorium endivia cDNA clone CCEM5610, mRNA sequence TGGATGCAGCGGTTCATCGAT EST sequence (targeted fragment marked with yellow): CGGGATCGGGAGCGCGATAATCAAATTTCGGGGGTCTTTTGATGGATTTTCTTTATTTTTTCGGAAACGTGTTTGATCCACGTCAAATGCGGATTTCGGTACAAGGGAGTGGGGTGTATATAAATAGGGAAAGAGGGTATAGTATTGATCCGATTTATATCGATGATCCGTTGTATCCCGCTAATAATGTTGGAAGGAATTGTTTTAGGATTCATCAATGTATAAAGGCGTTTGCGGACGCGTATTCTACTTTGGAGGATCGACTCGTTTCGATTTCTTCGGATAGTTGTGATTTGAGTAATTTGAAGTTGCTTCCGTTGATTATACCGAGTGTTGGTCCGTTGTAGATTTCGAAATTGAAAAAAATGTTTGTCGGTGTTTTTCGAATCAACCAATGAAAGAGGGTTGTTTTTGATGATGAGGGCGTTCTCGTCTTTTGCACAGATGAGAGATCAGCAATACATGTGACGGTACCGGTACTTTTTGGATGAGACAAAAGATTTGCAAATTTTTTGTCCATTGACATCAGCAGTGATGTACGCTGTATTGTACAATACTGGTACAAGTACAATACAGTAATATTTTCCTTTTTGGAAAGGACAAATGATTNNNGCATATTGTTCCATTTACGTCAGCTTTTTGGATGAGACAAAAAGTTCTGTATTGTTTNGGATGGCGCGTGCACGGATTTTCACGGGGAGCAAGAAAGGACATGACTGATTACGTACAGAA | |||||||||