miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TCATCGTCATCATCGTCGTCG
species: Cichorium intybus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|218978876|gb|FL673007.1|FL673007 CIRBL007A07 CiRB Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||.||||||||.||.||
TGTAGTAGTAGTAGTAGTAGG

EST sequence (targeted fragment marked with yellow):
ATCGGCCTCACAGAAAGGGAATTCATGTTAGAGGCAACTTCAAGGCATCGTGCCTTTCCTCATCTTAGAGTTCTCCCTGAAGATGGAGTTGCGATCCTTGATATTTCTGGTTATCTTGAAGTAGGACATTCAATTGATCATCATAGAGACATGCGCTTGGATATCGATCATATGTCATATGAGGAACTTCTTGCACTTGGTGAACAAATAGGAAGTGTTGGTTCACGTTTATCGGATGATTTCGTTGTACAACATCTAAAAACACGAGTATTTACTTCATCCATTTCCCAAGATGCATCTTCCAATGACCAACAACTTACCTCTTGCGTTATTTGTCAGACTAACTATGATGACCAAGAACAAATCGGGGTGTTAGATTGTGGGCATGAGTACCATGTGGAATGTGTGAAAAAGTGGTTGGTTGTGAAGAACACGTGCCCGGTTTGCAAATCAACAGCGCTTGCTGGAAAAGGAAAGGAATCATGAAAATGGAAGAAATGGGAAGGGAGACATGAGAGCTTGAAAAAGATTTGGGCACCGTGTTTCTTTTTCCTTAGTAAGTAAATGAGAGAAAGAATGGTGTTTGTTGTTTCTCTTGTTATAAATTATGGTAAATATTGAAACCTGGTTTTGTTAACCTTGGTGGGTTGGGCGTTTTGTTGAACCTTTCTGTACAGACTTTTTTTCCTGTTGGTTCACTGGTGGATTGGATGATGATGATGATGATGTGTTTGGGGTATGTACTTATGAATGTT



gi|218987990|gb|FL672710.1|FL672710 CIRBL003B12 CiRB Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||||||||||. .||| ||
AGTAGCAGTAGTGATAGCCGC

EST sequence (targeted fragment marked with yellow):
AAGACGAGCAGTTATTTCACGAGGTCGTGTACTCAAATCCCGTTTCTTTAGGGAAAAACTTCTGGGAGCATTTGGCGGATGCGTTCCCTTCACGCACCAATCGGGAAATCGTTAGCTATTATTTCAACGTGTTTGTGCTTCAAAGGAGGGCCGAACAGAACAGATGTGATCCAATGAACGCCGATAGTGATGACGATGAATGGCAGGGAGGTGAGTCATCAGAGGAAGATGACGATTTGTGTCGGGATGAGATTCGGGAATACGATTTCGGTACCGGAAATCCGGTTTTTGATTATTACGAAGACGATTCCTGCACGTCATCTGATACAGGTTTGGAACCGCAAGCGAGTGAAGTGAATGACTTCATCTTCGATCCTTCGGATTCGAAAGTTTGGGATTTGGGGTATTTCTCGTTCCCGAAGAATAAAGCGGATTTTTTGCCGACTGGGAGCATGATTGAAGAAGTATTTGGAGTTGAATCTTGGAGTATTGATAACAACAAAGGGTCGACCTAGTACAAAGCAATCTTTCGATTCTTGCGGTTTGACATGACACGTGTAAGCTGTTGTATATGTAACAAATTAGCACGTGGTTAGGATTAGTAGGTACTTTAGTATTTATCGCAAAGGTCATAATCGTTTGACCTTTTTTGCTCATCCCTTGTAAGAATTGGGGATGCAGTTTTTGTAATTAATTAGCC



gi|218983465|gb|FL673738.1|FL673738 CIRCL003E06 CiRC Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.||||||.| ||..|.
AGTAGTAGTAGTGGAAGTGGT

EST sequence (targeted fragment marked with yellow):
AAATGCGACCCGCGTCACGGCAAATACATGGCCTGTTGTCTAATGTACCGCGGTGACGTGGCGCCCAAAGACGTGAACGCGGCCGTGGGGACCATCAAAACCAAACGAACAATCCAATTCGTCGACTGGTGTCCAACCGGATTCAAATGCGGGATCAACTACCAGTCCCCGACCGTGGTCCCCGGTGGCGATTTGGCTAAAGTGCAACGCGCGGTGTGTATGATTAGTAACTCGACAAGTGTCGCTGAGGTGTTCTCGAGGATTGACCATAAGTTTGACTTGATGTACGCGAAGAGGGCGTTTGTGCATTGGTATGTGGGTGAGGGGATGGAGGAAGGGGAGTTTAGTGAGGCGAGAGAGGATTTGGCGGCTCTTGAGAAGGATTATGAGGAGGTCGGGCTTGAGTCTGGTGAAGGTGATGATGATGAAGAGGAGGAATATTGAGATACTCTGAGTAAGGGTTTAATTTCTTGTTTGACCTGTTTTTCCTCCGTTGACTTTTTTTTAGTATTACTATTGTGTTAGTTGTTGGTCTATTCTGATGTTTTGTTGGGTATGTTTTTAATGTTGTAGTCGAGTTGGTCTTTTGGACTGTTAAGCTGTTTTGAACTCTTTTACTTTGGAGTCGGTGATATCGCAATATGCTGTTTTTTGTTTGTT



gi|218985153|gb|FL682556.1|FL682556 CIRSN002A04 CiRS Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||||||| .||.
AGTAGTAGTAGTAGCAATAGT

EST sequence (targeted fragment marked with yellow):
AAAGGAACACCGGTTGTTAAAGAAAATTAAAGAGGAAAGTTTGAATATTATGTTAAATGGGTTTTTGTTACCAATACAAGGAAGTGTGGTGGTTCAATTTTTTTATGTGGCAGTGTAAACAAGGTAACAAATAATTGGTGCATTTAGGGTTGGATAGTTTTTTTGGTAATGGGCCCATGGTGGGCGTCCACTCAGCACAAATGATACCACTGTCACTAGAACAGCAGATAGCAGACGAGACTCGTTGTTACTTTTGTAATGACGTTGTTGCCCCTGTGGATTCAACAGCTAACCGCACTTTGGACCAGCAATGTACCGTGACACGTCCCGGACTTGCCCCAATTGCATCCGCCCTTGCGGTTGAACTTCTTGTTGGGATTTTACATCATCCTCTTGGAATATCAGCAAAAGCCGAATTTGGAAATTCTTTGGATAGTGGAAACAGTGAGCAACCTCTTGGAATTTTGCCACATCAGATCCGAGGCGCCTTGTCACAGTTTTCTCAAATGATACTTGTGGGACATTCCTCAAATAGCTGTACCGCTTGTTGCCCAACTGTGGTTTCAGAGTATAGGAAAAGGGGGATGGATTTTGTTGTAGAAGCAATCAATCATCCGACTTATTTGGAGGATTTAACTGGACTAACGGAACTCATGAAATCAGCCAACTCTTTTGAACTTGACTGGGATAACGAGACTGATAACGATGATGATGATGATTGTGTTGAAATCTGACCCTTTTTATGTCGTTAAAATACTCGTTGCTAATTCGTTGTCATGATGTTGATAAGATGATACATTGACAATTGTACAAAAACTGGACTACTTTGAGGAAATAACACTTAGACCCTTC



gi|218976471|gb|FL679158.1|FL679158 CIRNL004G01 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||||||||||||.|||| .
AGTAGCAGTAGTAGTAGCACT

EST sequence (targeted fragment marked with yellow):
TTAGGTGTAAAGGATCACAAATTGTTTCCTCAAGTGGAGGAGATCTTTCAAACCGGCGCGACGATGAGTCCGGCAGAGATGAGCGAGCTCATGATCTCGAATCGGGGGTCACCAGGTCGAGCGTTACGGTCGGTAATTACAGCCTTGCAGATCAACGTCGACGCCAGAGTAGCGTCGACGTCGACGTCGGTGGGGGGTAAAAACGGAATGCGGTTGCATCATGATGGCGTATTAGCCGTGGAAAAGTCGTCATCGCTGGCGGAAACATCGAGCGTCTTGGTGATGGATAGTAGCTGTAGCGTGCCTGTTGTGAAAGAGTTTCAGAAGCTGTACGGACTATTGAGGATGAAAGGCAGCAAGAAAATTGGTCCGTCAGATCAATATTCGGGCTCCATGGAACGGTCACGATGATGATGACGATGATTAGGGTAGTAATCTATGGGTCCCGCCCACATTGCCTTTTTTGTTGCTACGGATGGAAATAATTTGTGAATTCTCTTCTATTGTTTTTTAATTTCAACCTGCACCCCAAAAATATACTCGTACAATTATTTGTTTTTACATATTTTTGGGTGCCAATTGGTATAGGAATATGAAAACATATTGTTGT



gi|218982365|gb|FL673348.1|FL673348 CIRBN002E01 CiRB Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.||||||||.|| ||
AGTAGTAGTAGTAGTAGAAGA

EST sequence (targeted fragment marked with yellow):
GGTGAGTAAGGATGGATAGAGATGTGAACTCGGTTCCATGTGATGACTCTGAGGTAACTTTGAATGTATGCTTGGGCAAGCAGTTTACTGGTGGGGAGTTGTTTTTTAGAGGTGTGAGATGTGAGAAACATGTGAATACTGAAACACACCCAGAGGAAATTTATGATCATGCACATTTGCCTGGACGCGCGATTATCCACCGCGGGCGCCATCGACACGGTGCCAGAGCCACCACATCAGGCCATAGAATTAATTTACTGCTGTGGTGCAGAAGTTCGGTGTTTAGAGAGCTGAAGAAACATCAAAAGGAGTTTTTGAATTGGTGTGGAGAGTGTAAAAGGGAGAAGCAAGCGAGGCTTCTTCAGTCCGTGGCTGCGAAGAAAATGGAGTTGCTTGTGGGGCAAGGAGATGGTGGTGCTTTTAATCTTCGTTAGAAGATGATGATGATGATGAATGTGGTTTGTTATTTCAGCGTGTTGCAACATCGTTGTAAATTCAGGTTTCTTTCTCTTTAAGTTGAAGCAGTTGGTTGGACCACATTTCTGCCATTTGGACTTTGATCTTGAAAAGGTCGTTGTGGTGGAATGTTGTTTGTTAGAACTTTTATAGATTATGTGTCTTTTGTGATTCTTGTTGTCATGGAATGTTGTTTGTTAGAATGTGAAATGTATGTTATGTGCTT



gi|218987027|gb|FL679400.1|FL679400 CIRNN003C11 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||| ||||||||.||.| .
AGTAGGAGTAGTAGTAGTAAT

EST sequence (targeted fragment marked with yellow):
AGGAAAAAGAATAATTTCTGGTTGAACCCAGGCTGAAAAGCAGGGAGGCCCATTTCAGGGGCCTTCTAAGATGTTGGTTCTTTCTCAGGACTACAACTGGCCACCCGTGTTTTTGGTGCACTTAAGGGAGCCCTAGATGGTGGACTTGACATTCCTCACAGTGAAAAGAGGTTTGCTGGTTTTAGCAAGGACAATAAGAGCCTTGATGCTGATGTTCATCGCAAGTACATCTATGGTGGACATGTTGCTGCCTACATGAACACTTTAATGGAAGATGAACCAGAAAAATACCAAACACATTTTTCTGATTACATCAAGGCCGGTGTTGAACCAGAAAACATTGAGGAGCTTTACAAGAAGGTTCATGCTGCCATTCGTGCGGATCCTAACCCTAAGAAAACTGAGAAGCAGCCTCGGAAGGAGCATAAGAGGTTCAACTTGAAGAAGCTTACGTATGATGAGAGGAAGCAGAAGCTTATTGAGAGGTTGAATGCTTTGAATGCTGCCGCGGGAGCTAATGATGATGATGAGGATGAAGATGACGAGTGAGTTTGAATTTTGATGAAGGGACTAAAGTTGGTTTTGTTTTGTTTAGATTTGGATACTAGAATTATGTTTAGCATCTTGTGTGATGTTGGACTTGTTTTATTGTTTTTCAATGGTGGTAGTATTTTTGTTTCAAGACATGAAGTAATATGTTTTTGCCCATGCTT



gi|218982566|gb|FL672605.1|FL672605 CIRBL001F06 CiRB Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||| |.||.| |
AGTAGTAGTAGTTGTAGTAAC

EST sequence (targeted fragment marked with yellow):
TCTCGTTGTCATAAAGGTCGTTTGCTGTATTACTTTCCTGCTGAAAAAGGCAATGATGTTGATGATGATGACTCCATGTCATCATGGTGCGGTTGGCATACTGATCATGGTTCTCTCACCGGTCTCACGTATGCCATGTTTACCAAAGACGGTGTAGAAATACCATGCCCTGATGATACTGCTGGTCTTTATATCAAAACAAGAACCGGTCAAATAGTCAAAGTGGTGTACAAGGAGGATGAAATTGCATATCAAATTGGAAACATAACCGAAATACTTTCAAGAGGCCGTCTTTGTGCAACCCCACATTGTGTCCGTGCGCCAAAAGGGGAAAAAGCAACAAGACTTGAACGTTCAACTTTTGCATTATTTATGCAACCCGACTGGGATGAAAAACTTAAAATTTCGGAGTCGGGGCATGTCAATCAGGAGTTGATACAGGCTAATGAATCGCTTACATTTGGAGAGTACACGGAAAAGCTCCTTGACAAATATTATCATCTGAAAAATGTAGATACGCCCGCTACTGTATAACTTGTCAAATCTAGTTAGATATTATTTTTTTAGCTTGATGCAACTTTCTCATTGTTTGGATTTTGCTCATATAATAAAAAATGACGATATGATTATGGGCTATATATACTTGTAATAAGATTGAATTAAAAATGATGTACATGAATAACATTTAGTTATCCAAAGATTTCCTGGTACT



gi|218987145|gb|FL678641.1|FL678641 CIRNG002A12 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||.||||| ||.||||||
CGTAGTAGTAGAAGTAGCAGC

EST sequence (targeted fragment marked with yellow):
AAATTGAGCAATAACAAAAAGCGATCCGTGAGGTTCTTTCCAGTGAGTATCGTCGATGAAGACTGTCAACCGTTGACACAAATCTCTGTACGGAGAAGAATCAAATCTACCGACAATCAAATTTGTCAAAAATCCTATCACCGAAGAGTTTAAATTACTCTCAAGTGAGAAAACCGCCGCATTGAAGAAGCCGCAAGGGAATTGTTGAGGAATTACCAGAAAAAAGTCGAATGCGAGTTCGATTGATCAAGAACAATGTTGAAGGGAGCACCGATATAAACATGAACTACGACGACGATGAAGATGATGATGCCCCACCATACCAGCCCGATCTATTTGAGCTCGAGAACTTTCGCAATCGGAATGAAAAATATCGAGATGAATGCCGGTATACGAAACAACTCATTTTGATACGAATCTACCATGGGTAAATGGTAATGGCTCCCTCATTTAAAGAAATGATTACTAAATTAGGTTATTGTTAGTTATTTGGTGTGGGGTTTTACATGAAGATAAATTAGAAGTGAAATAATTCTCTTTTTGTTATATAGTAGAAGATTGGGTAAAATCGTTTGTCAATGGATGGAAGTTGTGTCTCCTTTCAATTTCGCTGTAAAATGAATTAATACTCGGCAAT



gi|218981775|gb|FL671040.1|FL671040 CIFCL007F08 CiFC Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
. ||||||||| ||| |||||
GTTAGCAGTAGGAGCCGCAGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTCAACAAGGAAAGTCTCCTCCCATAGAGGTCTGATAAACTCGCAACAGATTTAAGAAACAATAGTATATCAATCTGCCCCAAATTAAGATCTAAATTTCACAGAATTCGATGCTTCACAGCCGAATATTAGACATTATTATCAGGAAAAAATAAACTAACAAAATCACATATGAACAAATCCAAGTTCGAAGATTTTGCTCCTTTAGTTCAGTCCAGCAATTTGGACACTGGACACATGCTCCAACAATCCCAAGTCTAAACATAAGGCAGAATTACCATGGATTCGAAAACCTGAGAATCAATCGGAATCATCAGCCGCAAGGATCTGTCGCTGAGCCTCGAGGCGTTCGACGGCTTTCTGACGGGCCCACGTCTCTAGGGTTAGATCGGGCTTGGCGTTGAGTCCGACGCCGAGGATGACGATTGTTAGGAAGCTAGTGACGTAACAAGGTAGCTCCCAGTCTTCCCACTTTCTTGACTGGCCTGGTGGGAGAGGAGTCCGATTCAGAAAGTATCCATTAGGGCGCTCCTGGTGTCCTGGGGTGGTCCATCGGCTAGGACCGTCGCCGCCCCGTTGGCGGAGTGTGGAGGTAAGGCGTGATCGGAGCATGCCTGCGGCGGCCGAGAAGGGTTTGGCGGGGGGGGGCCCGGTACCC



gi|218985806|gb|FL680237.1|FL680237 CIROLOO8H05 CiRO Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||||| |||||. |.||.
AGTAGCAGAAGTAGTCGTAGT

EST sequence (targeted fragment marked with yellow):
AAAACTTCCCTCGAACGTTGTCTCCAAACCTCGTTTCAAAACTGGTATGGCCAAATCCATCCCCCATGCTGAGTCCTCATCAAACAAAGGCACATCAGAGTTGGAAGGCAAGTTGTGAATGTTCCATCGTTCATGGTGAGGGTGGACTCACAGAAACATATTGATTTTCACTCACGAGTCCGTTCGGTGGTGGCCGACCTGGAAGAGTAAAGAGGAAGAACCAGAAAGCAGCCGCTAAAAAGGCTGCCGGAGGTGATGCTGATGAAGACGATGAAGAATGAGCATTTTGATAATTGTTACATCGATCATGCTTTACCCCCATGAGGATAAAAAAGGAGTGTTTTTGTTCTTTTGATTACTTTAGACTTTTGTTATTAGTGGATTCTTGGTGGTTTTTAAGAAGCTATTGTTGGTTGATTTTCTGTTAAAGATTTTGTAATGGATTATGGATTTAGGGTTATCTAAAGTTTATGTTTGTTT



gi|218983914|gb|FL678143.1|FL678143 CIRLL008B12 CiRL Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
.||||.|||||||| ||.||.
GGTAGTAGTAGTAGAAGTAGT

EST sequence (targeted fragment marked with yellow):
GAGAAACAAAGGTGGAAGTGGCGTTTTTTGGTGTGGAAGAAAAAGGGGAGATAAAAACCGAAAATGCCCCTATGAAGGTATTGCCCCCATGGATGATTAAAGAAGGAATGAATTTACAAATGAACAACGTGGAGGTGTAAAGCAAGAATTTAATGTGGAGGGTACTTCGGGAAATATGGATTTGAAAGATGACAAGAAGTTGACTAGTCAAGAGGATGATGTCAAGAATTTCAGGATGAATATTTCAAAGCGTATTATGCTGCTTTACTTCAAAGGCAAAAAGAACAAGAAGAAGGCCCAAAAAGGAACAAGATTTGTCCATCAATACTGCTGACGTGGAGGCCTTAATTTTAGAAAACGCCAGCGTGACGATGATGTGGAATGGGAAGACCTCCAACCCAAGGTGAGGCATTCAAGGTGGACTTGAATGTGGAAGCAGCAGAGCCTTCAGGGGATGATGAAGATGATGATGATGGCATTGATTGGGAAGAGGGTTAATTTAATTCCCTAGAAAAATATTTCTCCCTTTAATTAGTAGTCCATTGTTTAG



gi|218972581|gb|FL682351.1|FL682351 CIRSL008F01 CiRS Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|| |||||||||||.||.||.
AGCAGCAGTAGTAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
CTAGCCAATACTTTCGTTTTTGGGGTCATCAAGGCTCTAACAACAACCAATGGCGGAATGCTGGCGTCGGAAATGATGCAGTGGTTGAACGGAAACCCAAGAAGCAATGGCAGCAGCGTATTCAGGATTGCAATTGAAAGCGGAAGAAGAGAACAAAGAAGAAATGCAGCTCAATTCTTTGTATAACTACACTACTTCCACCACTTCACAACAAACTCCGGCACATATGTCCGCCACGGCACTATTACAGAAGGCGGCTCAAATGGGTTCAACTAGAAGCAGCAATCAAGGGGACGCTAACGGGTTCGGACTCATGAGCACGGGTCTTCCAACTTCACTTCTTCAAAACAAGACAACAATGACGGATTGATGATGATGATGACGACGACAGGGCCAAAACAGTCCAAAGGAAACGGAGCAAATGAGACTAATGATGGGAAATTGACTAGAGATTTTCTTGGTGTGGGACGGAACGAAAGAAGATCGTTCAATTTGCATCAAGAACTGTTGAAGTTCACTTCTTCAATGGACGATTCAAGTATATGAACGTGGGTAATCAGATGTCATGTATCAGTTCAATGCATGAAAATACACATGATAATGTAAGAAGGGAAAAGGACAAAGGGAGTCACAAGAGGGGAATAATATTGATAGTACAAAGAGGTGGAATATGTTTGCAAAAAA



gi|218979221|gb|FL676496.1|FL676496 CIRGN004D02 CiRG Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.||||||| |||. |.
AGTAGTAGTAGTAACAGTCGT

EST sequence (targeted fragment marked with yellow):
ATGGGGATAATTTTTACTCCGGAAATTTCCGATGATTTCATTTTTAAGCGTAAAAGTATAAGGGAATTCACACCTCCGTCTCAAAACATTGAAGGAGAAACTCGAACAAGAGGCAACTGAGAATCTGGGGATGGCCATGATCTACACTCTAGTTAGCTCAGCTAAGGATGGGCTTTCTGAATTATATGCTCAAGATGCTGACAATGATGATGATGAAGAGGAATTCGCAGAAAAAGATGAGGTAATTTGTGCCTTTCATGGGAGAACCCGTGTGAACCAGTTTGAATAACTTTTTTATTGGCCATGGGAGGAGGAGGAGAATTTTGAAAGCCAAGAAATGTGGCCCTTTTTCAAAAAAAAGCCACAAAGGCTTGAAATGCCCGGGGAAATTCAAGCCATCTTTTTTCAGGCCACCCCCCAAAAAGAAAAAAAGAAGAAACTTTTTCTGGGTAAGAACAAGGTGGTTTTTGAAAAGGTGGAGAGGAGTCTTTCTTCGTGTGAAGAGGTGGCGGTTGCCAATGGAAGAATGGATATCGTGAATGAAGAAGAATGAAGTATTTTGAATTTTGAATGAATGGAGGAATGAATCTTGTGAAGAGAATGAATGAAGAGAATGAACAGTGTCTGTGGAGCATCTTATTCTGAGTCGTGAAGAATATCAGAATCTCTATGCGTGTGGAGGAGTTATCTTGAGGAGGCGAGTTTTCACCAAATTACACACTTAATTATTCCAACTTTGTGATATCTATATAATCTGCGGAGGTGTAATGTGGTGTAATATTTGTGGGTGCCCAAGAAAATTGTGGATATAAAAAAGAGGGGTTGTGTTGTGATATCCC



gi|218987145|gb|FL678641.1|FL678641 CIRNG002A12 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||| ||||| ||||||| |
AGTAGAAGTAGCAGCAGCATC

EST sequence (targeted fragment marked with yellow):
AAATTGAGCAATAACAAAAAGCGATCCGTGAGGTTCTTTCCAGTGAGTATCGTCGATGAAGACTGTCAACCGTTGACACAAATCTCTGTACGGAGAAGAATCAAATCTACCGACAATCAAATTTGTCAAAAATCCTATCACCGAAGAGTTTAAATTACTCTCAAGTGAGAAAACCGCCGCATTGAAGAAGCCGCAAGGGAATTGTTGAGGAATTACCAGAAAAAAGTCGAATGCGAGTTCGATTGATCAAGAACAATGTTGAAGGGAGCACCGATATAAACATGAACTACGACGACGATGAAGATGATGATGCCCCACCATACCAGCCCGATCTATTTGAGCTCGAGAACTTTCGCAATCGGAATGAAAAATATCGAGATGAATGCCGGTATACGAAACAACTCATTTTGATACGAATCTACCATGGGTAAATGGTAATGGCTCCCTCATTTAAAGAAATGATTACTAAATTAGGTTATTGTTAGTTATTTGGTGTGGGGTTTTACATGAAGATAAATTAGAAGTGAAATAATTCTCTTTTTGTTATATAGTAGAAGATTGGGTAAAATCGTTTGTCAATGGATGGAAGTTGTGTCTCCTTTCAATTTCGCTGTAAAATGAATTAATACTCGGCAAT



gi|218973019|gb|FL672832.1|FL672832 CIRBL004G09 CiRB Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||||| | || |
AGTAGTAGTAGTAGAAACATC

EST sequence (targeted fragment marked with yellow):
CAACTATAGATTCATGATGAATCAAATCCCATTGCCAAAGGTAGACTACAAAGATGATGATGATGAAGAAACACAAGACTAATAAGGTTGACTTTTAGAAAGTTGATATTAATGTAGATAGATATCTCCATAATTTGTAACATATAAATGCTTAAAGATTTTACTTTGCCTTAAAAAACAATCTCGTACATAAACTTCATTGGTATTTATGAAGCAAAAATATTTGCTTGGCCACCTTTTCGAATATTACAAAAAGCAATTATAACACC



gi|218982670|gb|FL677649.1|FL677649 CIRLL002A11 CiRL Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||||| ||.||.
AGTAGTAGTAGTAGAAGTAGT

EST sequence (targeted fragment marked with yellow):
GCGATTTTTATGGGAACACCAATTTCACTTTTAAGAAGCTCTTTTGTGGGTTTCAATTTTGTTTTACTCATTCTGGATGGAAGACCAATTTTTTAATCAAAACAAATCCCGGACAAGTCATCAAACCCTGATCAAAACAAGGGAATCAACGCTGAGGGAATGCCACAACACGGGAGACCATTCAGAGGGTAAATTAGTAATTCACTTAACGTGTCCTTCCCTGAAACCGGTTCCTAACAACCGAAAAATGCAAAATTGTTGAGACGATTTTACCCTCAAGTGGGGCCAGCACAAGTTCATCCGCAATGTCATTAGATGAATGTGAAGAAACCATTTTACATGATGTAAATATGGAAGAAGAAATGAGAAGAAAAGAGTATCAAGACAACAAGAAGCTTATGATGAAGATGATGATGATGAACCTGGAATGCAACGTGTCGGTTGTAACCAGCAGAAGTATTATGATATTATGATATTCTAAAGCTTTTTGGAGACTGATTTTATATTTTTTGTTTTTACTCTTAGTTTTTATGCATTGTTAGAGATTGGAATTGGTTTTTGGATTTAATGGTTATGATATTAAGTGATTTTAAAAAAA



gi|218977393|gb|FL678839.1|FL678839 CIRNL001A03 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||||| |||||||| |||
AGTAGCAGCAGTAGCAGGAGC

EST sequence (targeted fragment marked with yellow):
CCGATCCCGTTAAAGGCGAAGATAGTTTGGTCATGTGGGCAAAACCGAAGCTAGAAAAGGGGGATCTAGAGAGCATATTGGATGTCGATTTGGACAAAGAAGTCAACAAAGATCAAATAGTTCGAATGGCTCTAGCCGCAACACTTTGTCTCACACGATCGGCTAGAAGACGTCCCACGATGAATGAGGTCTTAAAAATCTTACAAGGGGAGCACGATTTAGACGAGAAAGCAACTCAAAATGATTTCGAAGTGTCGTGTAACGAGGACGATGACGACGATGATGAAGTTTATCCGGAATCAAATGCGGAGTCTCATTTGAATCTTGCGTTTCTTGATGTTGATGACAAGTCGACATCATTTGGTAGTGTGGATGTAAACCAACACACCCGTCTTACATTAGGAGAATACCTAAGGAGAAGATGGAGTCGTTCTTCGAGCTTGGAGTAGGTTTGTTTTTGTGTGAGGAAAATTCTTCGGTTTTTTTTTGGGAAGAATGTAAATAGTTTCGTATAGTTTGAGAATGTATACGAGGGGAAAACTTGCGCCCAATGATGAGGTGTTGTGTTTTAATGAATTGAGATGTAAAAGTGAGGGATTTTCTTGAG



gi|218988027|gb|FL677731.1|FL677731 CIRLL003C10 CiRL Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||| ||||| |||||||.
AGTAGCCGTAGTCGCAGCAGT

EST sequence (targeted fragment marked with yellow):
CCCCGTGAGTCGACGAGTGGCCCCCCCCCGTCAAATCCCGGGGTGTAAGAACCCCCCAACGATTAAAACCCGCCGCGGCACCTCTTAAGAGATGCCGATTGTCATAGTAATTGGGATTCATCTTCTGGTGTGATGATTATTATTGCGACGCCGATTCTCATCATCTTCCCGAAAACCCTTACCGTTGATTCAACCTCCCTCCACCGTTGGACGAGATCGGATTTTCCTCTAACCCAATTGACGACGCTGATGCCGATGACTTATTCGTCACCGCGCTTTGCCTAAAATTTTCTCCGGCAGCGATGACCGATATGGACGCTGCTTTCTCGATCTTTTCTGCAAACTTCTTGTTTTTTTTTCCCAAGAAAATCATCATCCGTGGGGATTCGAATGAAAACCTTGGTAAATTCCCAAAAAATCTTGATTTGTTTAGATTGATGATGATATTTGTAGATTAGTGTAATCTTAGACCACTATGCGATTAATGCTTCAACCTCTTACGAACTTAGAGTACGATCGTCGTAATTTTCCCGGAATCATAAAAAATTATATGTAATTTTCACTATCTGGATCTTGAGTTTTGTTCT



gi|218983914|gb|FL678143.1|FL678143 CIRLL008B12 CiRL Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.||||| ||.||.||
AGTAGTAGTAGAAGTAGTAGG

EST sequence (targeted fragment marked with yellow):
GAGAAACAAAGGTGGAAGTGGCGTTTTTTGGTGTGGAAGAAAAAGGGGAGATAAAAACCGAAAATGCCCCTATGAAGGTATTGCCCCCATGGATGATTAAAGAAGGAATGAATTTACAAATGAACAACGTGGAGGTGTAAAGCAAGAATTTAATGTGGAGGGTACTTCGGGAAATATGGATTTGAAAGATGACAAGAAGTTGACTAGTCAAGAGGATGATGTCAAGAATTTCAGGATGAATATTTCAAAGCGTATTATGCTGCTTTACTTCAAAGGCAAAAAGAACAAGAAGAAGGCCCAAAAAGGAACAAGATTTGTCCATCAATACTGCTGACGTGGAGGCCTTAATTTTAGAAAACGCCAGCGTGACGATGATGTGGAATGGGAAGACCTCCAACCCAAGGTGAGGCATTCAAGGTGGACTTGAATGTGGAAGCAGCAGAGCCTTCAGGGGATGATGAAGATGATGATGATGGCATTGATTGGGAAGAGGGTTAATTTAATTCCCTAGAAAAATATTTCTCCCTTTAATTAGTAGTCCATTGTTTAG



gi|218987027|gb|FL679400.1|FL679400 CIRNN003C11 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||| ||||| ||.||.||.
AGTAGAAGTAGGAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
AGGAAAAAGAATAATTTCTGGTTGAACCCAGGCTGAAAAGCAGGGAGGCCCATTTCAGGGGCCTTCTAAGATGTTGGTTCTTTCTCAGGACTACAACTGGCCACCCGTGTTTTTGGTGCACTTAAGGGAGCCCTAGATGGTGGACTTGACATTCCTCACAGTGAAAAGAGGTTTGCTGGTTTTAGCAAGGACAATAAGAGCCTTGATGCTGATGTTCATCGCAAGTACATCTATGGTGGACATGTTGCTGCCTACATGAACACTTTAATGGAAGATGAACCAGAAAAATACCAAACACATTTTTCTGATTACATCAAGGCCGGTGTTGAACCAGAAAACATTGAGGAGCTTTACAAGAAGGTTCATGCTGCCATTCGTGCGGATCCTAACCCTAAGAAAACTGAGAAGCAGCCTCGGAAGGAGCATAAGAGGTTCAACTTGAAGAAGCTTACGTATGATGAGAGGAAGCAGAAGCTTATTGAGAGGTTGAATGCTTTGAATGCTGCCGCGGGAGCTAATGATGATGATGAGGATGAAGATGACGAGTGAGTTTGAATTTTGATGAAGGGACTAAAGTTGGTTTTGTTTTGTTTAGATTTGGATACTAGAATTATGTTTAGCATCTTGTGTGATGTTGGACTTGTTTTATTGTTTTTCAATGGTGGTAGTATTTTTGTTTCAAGACATGAAGTAATATGTTTTTGCCCATGCTT



gi|218982179|gb|FL678568.1|FL678568 CIRNG001B06 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||||| |||||. |.||.
AGTAGCAGAAGTAGTCGTAGT

EST sequence (targeted fragment marked with yellow):
CTTCCTCGAACGTCGTCTCCAAACCCTCGTTTTCAAAACTGGTATGGCCAAATCCATCCCCATGCTAGAGTCCTCATCAAACAAAGGCACATCAGAGTTGGAAGGCAAGTTGTGAATGTTCCATCGTTCATGGTGAGGGTGGACTCACAGAAACATATTGATTCTCACTCACGAGTCCGTTCGGTGGTGGCCGACCTGGAAGAGTAAAGAGGAAGAACCAGAAAGCAGCCGCTAAAAAGCCCCGGAGGTGATGCTGATGAAGACGATGAAGAATGAGCATTTTGATAATTGTTACATCGATCATGCTTTACCACCATGAGGACTAAAAAAGTGAGTGTTTTTGTTCTTTTGTTTCTTTAGACTTTTGTTATTAGTGGACTTCTTGGTGGCTTTTTAAGAAGCATTGTTGGTTGATTTTCTGTTAAAGATTTTGTAATGGATTATGGATTTAGGGTTATCTAAAGTTTATGTTTGATT



gi|218981734|gb|FL680931.1|FL680931 CIRQL003H12 CiRQ Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||||| || ||||| ||.
AGTAGCAGAAGAAGCAGAAGT

EST sequence (targeted fragment marked with yellow):
CAGGATTCGAAGAACCGGACCGAACCAAAAAAGTGAAAATTCGCATTTTAAAACCGGACGAAGGGAAAATGCATCGCTGCTATTGGAAGAAAATATCTTCATCCACCGATCAAGACCCCCGAATTCGACCAATGAAAGGTGGAGCTAAAAGGAAGAGCATCAGTTCCGACCCACCGCCGTTTGGGGTCCACAACGATTGTTTCCCCCGGAAACGATAAGGCGGAGTACTACAAGCAGAATGGTGAACAACAACAGCAGCTTTGCTGCTGAATGACGGCGGCGACAAGTATGAAGACGAAGAAGACGATGAATATGACGAGGATTATGACGATCAGTTCGGTGACCACGAAAACGAAGGCGGGGGAGGAGATGAAGATGGAGGTGAAGGCGAAGGCGAGGATGCGGACGAGCGTCCCAAGCTAGCCGAGGGTTTTATGAGATCGAATCCGTACGAAAGAAAAGAAGTCGCAAGGGTAAAGTGCAGTATCTCATCAAATGGCGTGGATGGCCTGAAGCAGCTAACACTTGGGAACCATTTGAGAATCTTAAATCATGTTCGGATGTCATTGAAGCATTCGAAGAGAGAATTCGGTCAGGGAAACATAGATCGGGCAGGAAACAAAAACGCAAAAGTGGAGTTACCCTTCAACCCC



gi|218982320|gb|FL681345.1|FL681345 CIRQL009F01 CiRQ Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||||| ||.||.
AGTAGTAGTAGTAGAAGTAGT

EST sequence (targeted fragment marked with yellow):
TGGACAAGTCATCAAACCTGATCAATACAAGGGAATCAACGATGAGGGAATGCCACAACACGGAAGACCATTCATGAAGGGTAAATTAGTAATTCACTTCAACGTGTCCTTCCCTGAAACCGGTGTCCTAACACCCGAAAAATGCAAAATTGTTGAGACGATTTTACCCTCAAGTGGGGCCAGCACAAGTTCATCCGCAATGTCATTAGATGAATGTGAAGAAACCATTTTACATGATGTAAATATGGAAGAAGAAATGAGAAGAAAAGAGCATCAAAGACAACAAGAAGCTTATGATGAAGATGATGATGATGAACCTGGAATGCAACGTGTCGGTTGTAACCAGCAGGAAGTATTATGATGTTATTCTAAAGCTTTTTGGCTGACTG



gi|218982191|gb|FL679336.1|FL679336 CIRNN002F07 CiRN Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.|||||||| | || |
AGTAGTAGTAGTAGAAACATC

EST sequence (targeted fragment marked with yellow):
AGAGAAAAAAAAAAAAAAGAAGAGAGGGGTGTATGATCTTACATCTATTCATTGATGCAAAGACTCAATATAAAGGGGTGACACTGTGATGCTGGGGGTACTAGGTGTATTTATTGCCAACCGGCGGCATGGAATGGCCTACGGCTTTGGGGTTATTAAAAAACTTCCGAACGTGTGTATGGGCAAGATGTACAAGCTGAAAAATGGAGTTTTGTCTTCTGATGACATGGCGGGCCAAATAACACTTGAAAAGAATGGTAAAGTCCTTGAGTTTTTCCCTGGGGAGGTGTCAACTGATCGCATTAGTGCTATTCAGGAGGCTTATCGGAACATGGCATCTGCACTTTCTGAGGCTGATGGAATTGACTATACTGACCCTGAAGAGTTAGAGTTGTTGGTTGCAACATTGATGGATCTTGATGCAATGGATGGTAAAGGAAGTGTCTCATTATTAGCAGAGTGTTCAAGCTCTCCTGATGTCAATACAAGAAAAGCATTGGCTAATGCTTTATCAGTTGCACCATCAATGTGGACACTTGGCAATGCAGGCATGGGAGCCTTACAGAGACTGGCAGAAGACAGCAACCCAACAATTGCGGCTGCAGCATCTAAAACCATCTTGGAACTGAAGAGACAATGGGAGATAGAAGAAGGAGACAACTACAGATTCATGATGAATCAAATCCCATTGCCAAAGGTAGACTACAAAGATGATGATGATGAAACACAAGACTAATAAGGTTGACTTTTAGAAACTTGATATTAATGTAGATAGATATCTCCATAATTTGTAACATATAAATGCTTAAAGAATTTACTTTGCCTTAAAAAACAATCTCGTACATAAACTTCATTGGTATTTATGAAGCAAAAATACTTTGCTTGGCC



gi|218982958|gb|FL673687.1|FL673687 CIRCL002H07 CiRC Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
||||| ||||||||.||.| .
AGTAGAAGTAGTAGTAGTAAT

EST sequence (targeted fragment marked with yellow):
CGAAATGCTGCTGCTCGTGCTCGGTACATGAAACCAGCAGCACCTATTACATGTGCTACTTTTGCTCAAGATGTTTTGGAGGGGCGAGCCAAGGTCTCACAATCACACCATCACAAACACCAACCTCTCATGTTTGGACCCGCCAGTCTCGTGGGTGGAAGCCTCACAAGCGACAGGGAAAGGATTGCTGCACAGGTTTTCCAACCTGGTCACAGATTGCCAACGATGAGCATAGAAGAAGCTGGGTTGAAGGAGATGGAGATGATGAATAAGTTTCAGGAGAGTACTGCTAAGATGATACAAGAAGCCAATACTTCATGGCACAATGACAAGTGGAAGCCCAGAGCAGGTGGGGCCGATAATGATGATGATGAAGATGACGAGGCTGCACAGGACAAGGCACGCGCGTTTGATGACTGGAAAGATGAGAATCCTCGCGGTGCTGGAAATTCAAAGCTCACTCCTTGTGGCTGATCTGTCTTGTCTTTTTTGCTCTTCTAAATACTCTGCTTCTTCATGCCGTGATGCTGTACAAATCATGTCATTTGAGGATATATCATATATCATATATATATATGTACGATTCAGCTTATTTTTGTGTAGAATGGTGAATCAGTAAACATTATAACAACAGATTGTTTTGGGATT



gi|218973346|gb|FL676774.1|FL676774 CIRKL003G09 CiRK Cichorium intybus cDNA 3', mRNA sequence

TCATCGTCATCATCGTCGTCG
|||||.||||||.| ||..|.
AGTAGTAGTAGTGGAAGTGGT

EST sequence (targeted fragment marked with yellow):
TGGTGTCCAACCGGATTCAAATGCGGGATCAACTACCAGTCCCCGACCGTGGTCCCCGGTGGCGATTTGGCTAAAGTGCAACGCGCGGTGTGTATGATTAGTAACTCGACAAGTGTCGCTGAGGTGTTCTCGAGGATTGACCATAAGTTTGACTTGATGTACGCGAAGAGGGCGTTTGTGCATTGGTATGTGGGTGAGGGGATGGAGGAAGGGGAGTTTAGTGAGGCGAGAGAGGATTTGGCGGCTCTTGAGAAGGATTATGAGGAGGTCGGGCTTGAGTCTGGTGAAGGTGATGATGATGAAGAGGAGGAATATTGAGATACTTTGAGTAAGGGTTTAATTTCTTGTTTGACCTGTTTTTCCTCCGTTGACTTTTTTTTAGTATTACTATTGTGTTAGTTGTTGGTCTATTTTGATGTTTTGTTGGGTATGTTTTTAATGTTGTAGTCGAGTTGGTCTTTTGGACTGTTAAGCTGTTTTGAACTCTTTTACTTTGGAGTCGGTGATATCGCAATATGCTGTTAAATGGTTGTGTCTTTTTATAACTTGAAGAAGTTGAAATAAAGATGCTTTCCAAGGATTTT