| mature miRNA: TGCGGTTCAATAAAGCTGTGG species: Cichorium intybus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|218983379|gb|FL677294.1|FL677294 CIRKN002A09 CiRK Cichorium intybus cDNA 3', mRNA sequence TGCGGTTCAATAAAGCTGTGG EST sequence (targeted fragment marked with yellow): GGGCCAAAACCGCCCAAAATTTTAAAAATGGTGGAGGTTTTAGGGCTTTCAACCTTCAATTTAAGGGCACCCCCCCAGGGGCTTTAAACAACTTTTAATGGCTTTCCCGGGCTCGGTAATGTTTGTGGTGGAAATTTGGTGAGGGCGGGATTAACCCAAATTTTTCAACACCAGGGGAAAAACCCAGGGCTTAATTGAACCCCAAATGGAATTTAAACCGCCCCCAAGGGCTTTCGGAAAAAATTTAAAACCCCCTTCAAACTTTAAAAGGGGGAACCCAAAAAGGCTGGGAGGCTCCCACCGCACGAGGCTACGATTCCGTTGGGAAAGACACCTTCAATGTAAAGGATCGTTGGCGTGCTTGAAGAAGCGTGGATTCTTGGTGCTTTTCGGGACAGCATCAGGTGTACCAGACCCGGTAAGTGTCGATCAAATCGCACCCAAAGCTCTGTACTATACTTTTTCGTCGGTCACAGAATACACGGTTGATAATCGAGAGGAGCTGCTTGTAGCTGCTGAAGACTTATTTTCTGCAGTTGCAAAAGGAGTGTTGAGAATTCGTGTTAATCACAAGTATCCTCTGTCTCAAGCAACCCAGGCTCACATTGATCTTGAAGGTCGAAAAACAACCGGTTCTGTAGTGTTGATCCCGGACGAAGAGTGATTTCATGTAATATGATGATGTTTTGGATCTATCTAGTTTTTGTGGTTTTTGTTGTTACCTCGTGCCGGAATTGGGAGGGCCCGGTAC | |||||||||
gi|218974934|gb|FL681951.1|FL681951 CIRSL003F09 CiRS Cichorium intybus cDNA 3', mRNA sequence TGCGGTTCAATAAAGCTGTGG EST sequence (targeted fragment marked with yellow): GACCACCGGTTAATTGAACCGCAAGAACAGTGACCGCAAGGCTAAAATGGGAAGCGCGGGTTGTGGAAATCGAGAGCAATAGTGATGAAAAGTTACTTGTTTGCCAAAAACCGTTTTTAAAGAGACGATCAAATCCATCTTGAAGTGTTGGTTTTATTTAATTTTGGAACATTTTATGGGACAAAAGTGGAAGATTTTATGGAATGGAATAGTAAGATATGAAAGAGAGGGTTCGGTGAAAGCTGTGAACCCTACACCCTAAACCGAAAACTGGAAAACTGTGGGAGCTGTAAGGCAACCATGGTAGAATTGTAATTACACGAAGATTATAGGTGGGGAATTTTACACTTTTTTTTTGTTTGGTTATGTTCGTTATAAATTATAGAAAGCAAATGATGAATTTGGGTTATATATATAGAAATAAGAAGTTGGCATTTATGTTTTATTATTTA | |||||||||