| mature miRNA: TTCCACGGCTTTCTTGAACTG species: Cichorium intybus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|218979654|gb|FL675238.1|FL675238 CIREN001E02 CiRE Cichorium intybus cDNA 3', mRNA sequence TTCCACGGCTTTCTTGAACTG EST sequence (targeted fragment marked with yellow): TCTGAAAAAGCTTGGAAAGGGAATTGAAAGATTTCATGGAAAGGGATCCACTCGTCTTAGATTCTTTCATGGAATTCACACCCTGGACTTGCATTGCACTTGAGATTGGAGTTACTGGAAGGTATAGTGGCATACCATAGTGGTGATATTGAAAAGGCAAAGAAGTCACTGAATAGTGCTAGGGGTAGATACTTGCAGCTCCAGGTTCCAGATGAAGAACTATCAGTTCTAATGGGAATGGGGTATGGGGAACGCGCTTCAAAAAGGGCACTTAGATTGAACAATCAGGATGTTGAACGCGCTGTTAATTTTCTTGTTGAGGAAAAAGCTAAAAAACAACAAAAAATTGAGGATGATATTCGCCGAAGAAATGAAATCATGGAGCAAAAGAAGTTTGGAGTAACACCGCTCAGGAAAGCCGTGGATCTCCAAAAGTTAAAGGAATTGGTATCAATCGGTTTTGACAAAGAACTTGCTGCAGAGTCCCTTCGAAGAAATGAAAACGAAACTCAAAAAGCTCTTGATGATTTAACAAATCCAGATACTCAATTCTGATATTCAGCTTTTTATCGAATCACGAAAGAAGAAAAGATTGCGTCAATCTGGAGATGCTGCAATCGAGAGACTCACTTCCATGGGGTTTCCAAGAGATAACAGTTGTGGCTGCTGTTCGTGCTCATGGAACGGAAGAACTGGCTCTAAATCATTTG | |||||||||