| mature miRNA: AGTGGGAGCGTGGGGTAAGAA species: Citrus aurantium database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188445720|gb|EY848374.1|EY848374 CA26-C1-002-076-G11-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence AGTGGGAGCGTGGGGTAAGAA EST sequence (targeted fragment marked with yellow): CGGACGCGTGGGTTACTCCATGTATACTATTGAACGGGATGCAGTATCTACTATCCACGTCACACCTGAAAATGGTTTCAGTTATGCAAGCTTTGAGGCTGTGAGGTTATGATTTTGAGGGTGTAAATCTGACTCCCTTGCTTGGGAGGGGGCTTGCTTGCTTCTTCCCGCTGAGGATTACTGTTGCTCTGATTTCTGACGTTGCCGGCTATTAGCTTGGACACACCTTACAGCTGCACTTGTATCTATCTCTCCGGAGTCAAGAAGATATATGAGCACCTCGGCAATGATGTGTCACTCATCTACAAGCACTTTTCGAGTGATGGTTGTTCCATATCCCCTACGTCATCCTCAAAATGATGTTGGAGATAGGACAGAAAGGACGCACGATTGTGTGTGGAGGTAGGGGACCGGATATCATATCTGGCTTGCTATTATGATCTAACCCCTTCCCCTTTCACCATACAATGCCGGGCGTGCCCTTCCCCCGCCCTGCCTCCCACCGCTCTAACCATTCCGGCCTCCTCCCTGCCCGGCGCTCACCCACGCAACCCACGTACCTCCCAGCGCACCCTTAACCGACCACCACAGCTTCAACACATCAAAAACTCTAATCCAAATCACTCTCACTATCATCCCACCATCCAACCATCTATCGCCTCACAAAACCTGCATGCCAGTTCCTGCCTCACGCACCCACTACCCTTACTCTTCCTGAAAACGCCTTAACCAACATAACGTCCTTTAAGAACAACTCTACATTGTACTCCAGCGCTTCAACATCCTCTCTTCACCGCTACACACCCACCTTCCTCTACAACTACATCTTCTCCTCCTCAGATTGTCACATCTTTACCTAACTCCGCCCAAATCAATGCTAACTCACACATCCCTTCAACAATACAAACATAGCACCGACCTTTCACATGCCCAAGTACTTT | |||||||||