| mature miRNA: GATGGTTCAATGCTGGCGTTA species: Citrus sinensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|56527735|gb|CX043444.1|CX043444 UCRCS07_11B03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 GATGGTTCAATGCTGGCGTTA EST sequence (targeted fragment marked with yellow): CTCCTTCAAAAGCATTATGGAATCTCTTTCTATTAACAAAACTTCAGTTACAAACCAAAACAACATGATGCAAACTTACTGAACTAACTACCTGATGAGGCTTTAAAGTTTAAACTTAGTGATGCTCTTATCTTCTGTAAAATTATAGGCAGGAAATATAGGAAGGAAATATAGGCAAGATCACTGTTAAGTGGTATGGTACAAGAAAACACAGGTACCCTATTATTGCATATGAAGGGCTCAATAACTCCCAAATAGGCCAACAGAAGCTGGAGTTAATACATCAACTGCAATTAAATTGCAAAGTGTGCAAGCTCCTAGTCCCGCAGCATGATATATCAGAACCGCCATTACATTAGCTTTCTCTGGGTCAGAATCAGAGTAGCACATGGTCTCATAAAAAAGATGACAACAGGGATAAGTTTGGACTACAATAGTCGCCTTCTAAAGTTCCGAGCGGTGCCTTGGTAAGTTCTAACCAGCATACCCACTCCTATTCCAATCCCTAGACAGATGCTCAGGCCAATGCCAACCCCCACCCTGACACCAGCATTGAACCATGAGAGTTCTTCATCTTCGCCTTCCAAAAAATCAGTCCCCGAGTATAGATGGTTGTAGTATTCACTTTCCGGTTTGTGATCTGAAAAATCTGATACCTGCAAAGGCAGCTCAGAAGGAGTATCTTTTTGGGACTCTTCACTAGCCTCATACTCTGGTATAGAATCCAACACCCCCCTCCTCGTTTGCTTTTTCCGAGAACTAAGCTGCAGGGTCTTGGTTAAGATGATTGGAGTGCCTGAGAAGGTCCCTGCAACATAGACCTCATTTGTAGGCGAAGCAAAGTCTGAACTCA | |||||||||