| mature miRNA: GGAACTGAACCGAACTGAAGC species: Citrus sinensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188362266|gb|EY665060.1|EY665060 CS00-C1-101-073-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CGNATTAAAGGCACGACCCAGCGTCCGCTTTTGCCTGCGCTGATNGATTTTATAAAAACTCCTTGCGCAGGTTATACCGATTGTTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGTTCATACTTGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACCATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG | |||||||||
gi|188407211|gb|EY702488.1|EY702488 CS00-C3-701-007-E11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): AAGAGANNAGGAAAATGTAAACATATTATGTTGCCCTGCGGTACGGTCCGGCAATTCTTTTGCCGACCCCGCGTCCGGGCACCAGATTCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAGTTGGTGGAAATATTGATCTTCTTGTAGTCCCACCATATGGAACAAACCCTGATCACACTGGTTAACAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGCATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAACAGATTCTCTTTGGCTAGGTATGTATGGGGACCTTGTTTTCCTAAAACCAAAAATAAATAAAAAAATTTAATAATCATAAACACCAGCGTCCATACTGTAATCTATCCCGAGCCTTTCGTCGTTCTGCTACCCCTCGCGCCGCCAGACGACCCGCCCGGCTGGGCCTCCCCCCCCTCCACCCCCCTCACTCTGCCCCCCCTCCTCCCCCCACCCCCCTCCTTCCTCGAACGCGCCACTTCACCCCCTTATACTCTCCTCCCCCCTCCCCCCGCCACCCTCCCCCTCTCCTACCCTTCGCACCTTTATCTTACCTCCGTCCTCACCTCTCCGGACCCCGCAGATACATGAGATTTCCACCCATATCCCTCCTTGAATGTTCCCTGAGTCGCTTGCCCTTTTTCCCCCACCCGCTCTCTTCCTGAATAGCGGCGCCCCCCCCCTCCCGCCTCCCCCACCCCCCCCCCCGCCGGCGGGCGGGAGCGGCCCCTCTTTTCTGCTCCTCTTCTCTCCCCCCGCGCCCCTTCGCTTCCCCTCTCACCCCCCTTCCCCGCCTCCCTCCCCCCAACGCCCCCCACTTGGTC | |||||||||
gi|188401035|gb|EY708941.1|EY708941 CS00-C3-701-104-D12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GGGGGGNNACACACCAACACCCCAAACAAAAACCATGAGAGGAAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGAAACACAGTAACAAGGTTATTTACACTGACATCACACGGAACCCAACAAATATAAAGAGGCAACAAATACTGACAACCAGTCTTCATAGAGACCTGAAAAGCGTAGAAACAAACCACTCTCAAGATATTGAATGCCGCCTGTTTTTGTTGGGTTTAGTTCCAGTTTTTGGATTTGAAGGTGAAACAACATCCGCCCGAACAAATGGATAAAGCCGCCCAAGTTTTTTGGACACAGAGTTGATGAAAGATTTTCTAGGCAAAGGTGGTTTATCAGCAGAGTATTGGGCGTTTACCAGTGGACTGCTGGCTGCTGATGATTTGGGAGATGACTTTTCAATTTCCTTCAATTACATTGTCATCTTCAATAACTCAATTTTCAAGTCCTCATTCTCTCTTCATAAACTAGAAACCCCATTTGATACTGGGTGGACATCGCCGCAACATACATTCATTTTGGACGGAACATCAAGGGAATCCCCTCCCCCGAGGCTTCCCACCATCACAATGGAAAATGCACAGATAGACACAAAACAACACTCCACCTAAAACAACAAAACAGCAGCCAGCTCTTTTCGGCTAAATGACTCTCCACTCTCCCTGCAGACGCTCCGGGAAAAGCAAAAGGACGGCAGGCCTACCTGCACCCCACGTCAGTGAAAAAAAGATCCAACTTGAGGAAAACAAGTAGGGGCGTACCATGTCTATATCAACTCATTCGAGTCTGCTCCCGCAACCCACACCACCAGCAGCGTGGGCGGCGGCCCACACACGTCTCTGCGGGGGGCGCCCTCCGCCACAGTGCCGCCCCGGGAGCGTACAAACCT | |||||||||
gi|55404917|gb|CV718764.1|CV718764 UCRCS08_0010P11_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensi GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): AGCTTTCTTCTCAGCAGCGTCAGCTTTGCTTTTGGCTGACTGAATGTCTTCTTTTATCTTTCGGTCATGACGGCCGACCTTCACCTTATAGTAAGTGGCCATGCAGCCAAGGTGAAAAGCACTTAACTGCATAACCCCCACCAACTCGCCTAGAGTGCTGCCATCAAAATCCTCAAAGTGCTTTTTGCTCACGAGCCTAGAAAACTCGCTGATATAGGGGACTAGATGCTCTGGTTAAGGGTGGGCACGGTTCGGTTCGATTCGAAATTAAGTAGAACCGATTTAAATCAGTAATTTTATGAAAAGAACCGAATAAGAACCGAACTCAATAAGAACCGAACTCAAACGGTTCTTTTCGGATCGGTTCGGTTCGGTTCGGTTTTTTCAGTTCTGGGCCTATTGGGCCTATTTTGAATTTTTAAATTTTTAGCCCATTGGGCCTCATGAATGTAATAATTTTTTTCAACAATTAATTTATCCTAATTTTATTACAAATATTAACAATAAATACAAAGTATTTAAAACACATTTTATCACTAATATCTTACTAACTATTAATAAGATACTCCCAAAATATGAAATATTAAAATTTCAAAATACATAACCAAACTCCAATACTCCATCTATATAAACATAGTCATAATGTTATAAAGAGAAATAACACATGTTTGATTTGAATAAAATTATTAACACATGTTTGATTTGAATAAAATAAAAAAATAATTCGGTTTTTCGGTTCAGCTAAGTGAACCGAATACCAAACTGACATTTCAGTTTTTTTTACAAACGGT | |||||||||
gi|71601220|gb|DR911971.1|DR911971 USDA-FP_20099 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-22_D08 5', mRNA sequence GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): TATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCATCAATTGTATGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACTATGTTTTTCTAAAAGAAAAATAAATAAAAAAATTTAATAATAAAAAAAAAAA | |||||||||
gi|188357996|gb|EY703772.1|EY703772 CS00-C3-701-025-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGTAGGCAGAAGACACTGTCATCTATTCGGCAATGCAGTGGCAGCAATCTTTCTAAGATTCTGAAGAAAGCTCCTCCAGTTTCATCTCAGTTCACTTGCTCCAGCCTCCAAGAGGAACAAGACCTTGAATAATAAGTTGAGAAACGTAAGGATTTAATTATTTCTTGTGTGTTTGCCCTGTGTGTAAATTAGTACTTGGCGAAGTGCCTATCTTTGTATACAAGCCATGTAATTAATGGTTTCCTCCCAAGTTTGGGGTGCCATATAATCGAAGTTTTAATGGAGTAAATAATTAGGGGTGGGCACGGTTTCGGTTCGGTTCGGTTCGGTTCGAAATTAAGTAGAACCGATTTAAATCGGTTATTTTATAAAAAGAACCGAATAAGAACCGAACTCAAAAAGAACCGAACTCAAACGGTTCTTTTTGGTTTGGTTCGGTTCGGTTCGGTTTTTTCANNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNGNNGGGGGGGGTTTTAGGAATAAAAATTATTATAGGGGGGTGGGGAAGTTTATTTTTTTTTTTGGGGCTATAAAATATAGTTCTGGCCGTGTTTACAAACCCCAGGGGGGGAAAAACAGGGGTGTCCCACAATAATATGTTGTGGCAAATTCCCTCTTTTTCGGGGGGGGGATAAAAAAAGAAGGCCCCCCCATTCCCCCTTACCAAATGCCCCCCCCAGGGGGGGAGGGGGACCCCCCTTAGCCGCCAAAAAGCGGGGGGGGGGGTGGTTCCCCAGGGGACCTTAATTTGGAGGGCCTTAT | |||||||||
gi|188357996|gb|EY703772.1|EY703772 CS00-C3-701-025-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGTAGGCAGAAGACACTGTCATCTATTCGGCAATGCAGTGGCAGCAATCTTTCTAAGATTCTGAAGAAAGCTCCTCCAGTTTCATCTCAGTTCACTTGCTCCAGCCTCCAAGAGGAACAAGACCTTGAATAATAAGTTGAGAAACGTAAGGATTTAATTATTTCTTGTGTGTTTGCCCTGTGTGTAAATTAGTACTTGGCGAAGTGCCTATCTTTGTATACAAGCCATGTAATTAATGGTTTCCTCCCAAGTTTGGGGTGCCATATAATCGAAGTTTTAATGGAGTAAATAATTAGGGGTGGGCACGGTTTCGGTTCGGTTCGGTTCGGTTCGAAATTAAGTAGAACCGATTTAAATCGGTTATTTTATAAAAAGAACCGAATAAGAACCGAACTCAAAAAGAACCGAACTCAAACGGTTCTTTTTGGTTTGGTTCGGTTCGGTTCGGTTTTTTCANNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNGNNGGGGGGGGTTTTAGGAATAAAAATTATTATAGGGGGGTGGGGAAGTTTATTTTTTTTTTTGGGGCTATAAAATATAGTTCTGGCCGTGTTTACAAACCCCAGGGGGGGAAAAACAGGGGTGTCCCACAATAATATGTTGTGGCAAATTCCCTCTTTTTCGGGGGGGGGATAAAAAAAGAAGGCCCCCCCATTCCCCCTTACCAAATGCCCCCCCCAGGGGGGGAGGGGGACCCCCCTTAGCCGCCAAAAAGCGGGGGGGGGGGTGGTTCCCCAGGGGACCTTAATTTGGAGGGCCTTAT | |||||||||
gi|61690010|gb|DN620910.1|DN620910 UCRCS11_05P18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citru GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): TAAAGCAGTATCGGCTTCAGTTCGGTTCAGTTCCATGTTCTATACATCATATTTNGGTGAAAAGGAAGAATAAAATTAACAAAAGACATTACAAGCTGATCAATATGCACCACCTCAAATACAATTCATATGGACAGCAACACAACCGATAAGTCGAGGAGGGGGCGGTAAAACTCTCTTCCAGAATACCTCTCTTCCAAGACCCAGTTTTGAATGATTGATCCAAAAATTTGGAGAAACTGATCAACAGAAATGGAATGTACACACCAACAGGGAAAAGGATCAGCACAGTGATTAGTCAAAGCTTGATGTGCGACTCCATCTCCCTTGTAAATAATCTTCTACTGAGATGATTTGCTGGGTACTGCCAGCAGAAACTGAATCGTCATCCAAATCTAGCAATGCAAGATTAAGATGAGACTGGATATTAGTAGGGGATGCTTCCCCATCAATGCTATCGAGTTCCTCTGATGCACTGACTTGTTCCTTCGCCCAGTTTGTTGCTTCCTCATCACCTTGAAGGAGCTTCAAAACAAGGTTTATCTGAGGACGAACTGCGGGTGCTCGACTGATGCTAAGTGTTGCAGCTAAAACCATTCTCTCAATCTGATCATTATCATAATCAGTGTCTAAACTTGGATCTAGCAGTTGAGAAACCTTGCCATCTTTCAAAATCGGCTTTGCCCACATAACAAGGCTCTCCTGACCCTTTGGATTTTCACTGTTAATAGGCTTTTTACCAGAAAGAAGCTCTAGCAGTACAATACCAAATGCATACACATCAATTTTCTCACTCACTTTGCCGTGCA | |||||||||
gi|229045926|gb|GO242319.1|GO242319 967 'Cara cara' navel orange fruit cDNA library Citrus sinensis cDNA clone 1118 5', mRNA seq GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CACAGCTTCTTTTCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAAAAAATAAATAAAAAAATTTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|188356169|gb|EY709175.1|EY709175 CS00-C3-701-109-B03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GGGATGGAAAANAAAAATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACGCGTCCGAGCTTCTTTTCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTAGAAAAAAAAAGGGGGGGGGGGGGGGTTATTCCCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAAAAAATAAATAAAAGAATTTAATAATAGGGAGGGACAGAGGGGACCAGGTGAACAACATACTACACTTGTTGTAGACGTCGGGCGGACTCTTGAAAGGGGGGGCGGCTCTAAAGGACCAAGCCTAACAACGCCGTGCTGCGGCAGCAAAGCTCCTTCCAAAGGGGCCCCAAACTTCAATTCCCGGGCCGCCCGTTTTACCCCCCCGGAACTGGGGAAAACCCGGGGGGTCACCACCTTTGTGCGGCGTTGGCAACCATCCCCCTTTTCGCCCCTTGGCGTAAAAATAAAAGGGCCCGCCGCTAACCGCCTCTCCCACAATATGTCCCCCCCCCCATGGGCAAGGGGGACGCCCCTTGGTGCCGTCCTCTTTTCCCGCCCGGGCCGGCGGGGCTCCTCCCCACGAGGGCCGGGTCCTCTGTTTGAGCCCGTTGCCCCCGCGCGCCTCTGTCTTGTCCTCCGCCTCCCCGGCCGCCGGCGCCGCGGTGTCCCCTCTCGCCTCGAGGGCGGGGGCCCTCCGT | |||||||||
gi|46207742|gb|CN182805.1|CN182805 UCRCS04_0003A19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_RE GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GTCCGAAGCCAGCAGAAATCTTTNTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATTTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAG | |||||||||
gi|188357996|gb|EY703772.1|EY703772 CS00-C3-701-025-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGTAGGCAGAAGACACTGTCATCTATTCGGCAATGCAGTGGCAGCAATCTTTCTAAGATTCTGAAGAAAGCTCCTCCAGTTTCATCTCAGTTCACTTGCTCCAGCCTCCAAGAGGAACAAGACCTTGAATAATAAGTTGAGAAACGTAAGGATTTAATTATTTCTTGTGTGTTTGCCCTGTGTGTAAATTAGTACTTGGCGAAGTGCCTATCTTTGTATACAAGCCATGTAATTAATGGTTTCCTCCCAAGTTTGGGGTGCCATATAATCGAAGTTTTAATGGAGTAAATAATTAGGGGTGGGCACGGTTTCGGTTCGGTTCGGTTCGGTTCGAAATTAAGTAGAACCGATTTAAATCGGTTATTTTATAAAAAGAACCGAATAAGAACCGAACTCAAAAAGAACCGAACTCAAACGGTTCTTTTTGGTTTGGTTCGGTTCGGTTCGGTTTTTTCANNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNGNNGGGGGGGGTTTTAGGAATAAAAATTATTATAGGGGGGTGGGGAAGTTTATTTTTTTTTTTGGGGCTATAAAATATAGTTCTGGCCGTGTTTACAAACCCCAGGGGGGGAAAAACAGGGGTGTCCCACAATAATATGTTGTGGCAAATTCCCTCTTTTTCGGGGGGGGGATAAAAAAAGAAGGCCCCCCCATTCCCCCTTACCAAATGCCCCCCCCAGGGGGGGAGGGGGACCCCCCTTAGCCGCCAAAAAGCGGGGGGGGGGGTGGTTCCCCAGGGGACCTTAATTTGGAGGGCCTTAT | |||||||||
gi|188310849|gb|EY676128.1|EY676128 CS00-C1-401-019-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA se GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGAAGCGTGGGCTTCCCAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAAAAAATAAAAGTAGGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTTACTTGTAAGATCTCTTGATATAACAAGAGATTCTCTTTTGGCCTAGCTATATTATGTGTACCTTGTTTTTCCTAAAAAAAAATTAAGTTAAAAATTTCAAAACAATGAAGATGATTGAATTTGTGGCAACAAAACAACAGAAAAAATTAGAATGGAATAGACAAGAGACACAAAAAGGGGCGCCGGCTTTTTGAAGATACGAGATAAATCAACCTAGAAAAAGAAAAAAATGGCATTAAAAGTGGTCAAACGAAAATAGATATAGGGGAAAGCATTTACGCAAGTCTTAAAAAGGGAAAAAACCTTGCATTTCCACAATTAAACCGATAAAAGATAATAAACACAATTAAAGAGAATGGAAATAAAGAAAAAAAATTAAAATCATAATTTCTCTTTTATAATAATCTGACTTCTCCATATGTCTTGATCACAGTATTCGTATACCTCAAACAAGTATAAGATGGGAGCAATAAATCGGAAATAAAACAACTCTACACGCACCAAATACGGATAGGCCAAAAGATAGAGAGAAAAATGATAGATAAAGGATGTAAAATGGGAACAGAAACTGCTAGGAA | |||||||||
gi|56527595|gb|CX043304.1|CX043304 UCRCS07_10B10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): TTGATCTTAATCACATCAGCACTTTCCCATTGGCTGATGCCTCAAGTTATAAACATACAAAGCAAAGAAAAGGGAACAGCCCAAGGGCAGTCTTACACATAACACAGATAACAAGGACTAGATACGCAACTGCAAATTCACCTCCGAAAAACTCACAACGGTTTCTTACAAGAGGAGAAAGAAATTAAAATTAAAGGTTCCATGATGGACCGGAAACAAACACTTTATTCACAAAACCTCACAACATTATCTCATTATTCGCATCAACCATCCATCACAACCACCTAAATACAACTACTTTTTTGCCAGAGTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTTATTACCAAATTAAGCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGCTCAGGGTGAACGCCTCCCACATATGTACCGTCTAATGCATTCGGCTGGCCCAGTGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTCCAAATGTTGGCCCCATTCGAGGAGCACCATCAATCTCGGCAACTTCCATGCCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGCATCTTCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTG | |||||||||
gi|56590474|gb|CX076484.1|CX076484 UCRCS08_50C07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GATCGGTTCGGTTCGGTTCGGTTCGGTTTTTTCGGTTCTGGGCCTATTTTTAATTTTTAATTTTTTAGCCCATTGGGCCTCATGAATGTACTAATTTTTTTCAACAATTAATTTATCCTAATTTTATTACAAATATTAACAATAAATACAAAGTATTCAAAACACATTTTATCACTAATATCTTACTAACTATTAATAAGATACTCCCAAAATATGAAATATTAAAATTTCAAAATACATAACCAAACTCCAATACTCCATCTATATAAACATAATCATAATGTTATAAAGAGAAATAACACATGTTTTATTTGAATAAAATCATGTTTGATTTGAATAAAATTATTAACACATGTTTGATTTGAATAAAATCAAAAAATAATTCGGTTTTTCGGTTCAGCTAAGTGAACCGAATACCGAACCGACATTTCGGTTTTTTTTACAAACGGTATATTCGGTTTTTTTAAAAAATAAAAACCAAACCGAATTAGAAAAAACCGTCGGTTCGGTTCGGTTTTTTTAACACTACGGTTTTTTTGCCCACCCCTAAGCCTAATACTGGACGGGACATATTTTGCACGATAAAAATAAATTAGGCTAATGTTAAGTTACGAACACGTAACTTATAATTCTTTCACATAAATAGTGAGTAAGTCCATATCATTCACTATTTATGTGAGAAGATTATAAGTTA | |||||||||
gi|188350231|gb|EY686507.1|EY686507 CS00-C2-003-054-C05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequ GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CGGACGCGTGGGTGAAGTTTAATTGGAATTTAACAATTGTTTTATATTTTTTTATGGTTCTTTTTAATTTGAGATGTTTTATTATGTATTGGTGGTGATGACATTGGATATATAATAGATGTATTTATTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCCTAAAAGGCCCTTCTTTGGCGTCCGTTTGGTTCGGTTCTTGGTCGGTTCTTTTGGGGGGCCCACCCTTGTGTTTCCCGCGGGGATTCCCCCCCCTTTTCGCCTTGGGGAAAACCCCCGTTTCCCCCCCTTTGCCCCTTTCCGACCAAACCCCCCTTCGGCCCCCCTTGATAAACGCGCCCCCGCCCTGCCCCGCCATTTTTCCCCCCCGGGTTGCGGCCCTTATGGGGCGGGGGGACGCGCCGTTTGCCGCCCCATAAACCCGCGCTTTTTTGCTTTTTTTTCCCCCCGCTAACTCCCCCTCTTTCGACTTCTCTTCCGCACGTTTTCTTCGTTTTTTCCCCGTTTTTTTCTACACCGGGGATGGCCGGTTGGCGCCCCCAAACCCCGAGGTAGGGGGGACCTCGAAGGGCACAAGATCTTAAAAGCTGTAGGGGCGCCGCGAAGCCGGGAAAACATGTGTGGGGGGGGGGGTGTTCACCCGTGCGTCCCCCCCCCCCATAGTAACCGACTTTAACCACCTCCTTTGAATGCGACGACACCAACCAAGAAACCACGCACGGCTCTCCCCGGGCCGAAGAAGCGGTGAAAACGAACGAACAGGGTGTTGGCGACGGA | |||||||||
gi|68274515|gb|DR405548.1|DR405548 CSAD-PNP1242M18 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242M GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GGGGGCTCAAGCACAGCTTCTTTTCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTATGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAAAAAATAAATAAAAAAATTTAATAATAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|46208908|gb|CN183971.1|CN183971 UCRCS04_0004M23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_RE GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GAGGCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAGCTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAAAAAATAAATAAAAAAATTTAAT | |||||||||
gi|188357996|gb|EY703772.1|EY703772 CS00-C3-701-025-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGGTAGGCAGAAGACACTGTCATCTATTCGGCAATGCAGTGGCAGCAATCTTTCTAAGATTCTGAAGAAAGCTCCTCCAGTTTCATCTCAGTTCACTTGCTCCAGCCTCCAAGAGGAACAAGACCTTGAATAATAAGTTGAGAAACGTAAGGATTTAATTATTTCTTGTGTGTTTGCCCTGTGTGTAAATTAGTACTTGGCGAAGTGCCTATCTTTGTATACAAGCCATGTAATTAATGGTTTCCTCCCAAGTTTGGGGTGCCATATAATCGAAGTTTTAATGGAGTAAATAATTAGGGGTGGGCACGGTTTCGGTTCGGTTCGGTTCGGTTCGAAATTAAGTAGAACCGATTTAAATCGGTTATTTTATAAAAAGAACCGAATAAGAACCGAACTCAAAAAGAACCGAACTCAAACGGTTCTTTTTGGTTTGGTTCGGTTCGGTTCGGTTTTTTCANNNNNNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNTNNNNNNNNNGNNGGGGGGGGTTTTAGGAATAAAAATTATTATAGGGGGGTGGGGAAGTTTATTTTTTTTTTTGGGGCTATAAAATATAGTTCTGGCCGTGTTTACAAACCCCAGGGGGGGAAAAACAGGGGTGTCCCACAATAATATGTTGTGGCAAATTCCCTCTTTTTCGGGGGGGGGATAAAAAAAGAAGGCCCCCCCATTCCCCCTTACCAAATGCCCCCCCCAGGGGGGGAGGGGGACCCCCCTTAGCCGCCAAAAAGCGGGGGGGGGGGTGGTTCCCCAGGGGACCTTAATTTGGAGGGCCTTAT | |||||||||
gi|68272793|gb|DR403826.1|DR403826 CSAH-PNP1246G10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G10 5 GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GGGGGCTCAAGCACAGCTCCTTTTCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGATATCTTTTGCCTTCCTGATTTGAAGATTATGGGANNNCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAACTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGGTGGTCTCAGTTTGGTTCAGTTTAACTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAAAAAATAAATAAAAAAATTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|46208560|gb|CN183623.1|CN183623 UCRCS04_0004E12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_RE GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): GAGGCTTTTGAGTTTTGAATACGGTTCAGTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAAGATTATGGGAACTCCTTGCGCAGTTCGAGTAGCAGGGAAGTCGCCTTTGTTGGGAGAACCTGTGCCTCTCGGTTCGAGCGGAGACTTCTAGTCTGGGTTGTGGTACAAGCTTAAAGGTGCCTCCCACAGTTGGGGCCCTCCCCAGGATACCTCATGGTCAAAACCAAAAAAAAAAAAATGAATTTTTCAGGTTATACCGATTGGTCGGAGGGTGTAGGTCCCCCATTTTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTGGTCCCGCAATATGGAAGAAATCTTGATCACACTGGTTAAGAATATGCAGTATTAGTCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTATTGTTATTACCCGTCAATTGTATGATGGTCTCAGTTTGGTTCAGTTTAATTTGTAAGATCTCTTGATATATACAAGAGATTCTCTTTGTCTAAAAAAA | |||||||||
gi|188418743|gb|EY727662.1|EY727662 CS00-C3-703-104-A06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cD GGAACTGAACCGAACTGAAGC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGTTTCTTTTGAGTTTTGAATACCGCTCTTTCGAAGCCAGCAGAAATCTTTTGCCTTCCTGATTTGAATATTATGGGAACTCCTTGCGCAGGTTATACCGATTGGTCGGAGGGTGGGGCCCCCCCATGGTTTTCACTTATTGCTGATGATGAAATTAATGGAAATATTGATCTTCTTGTAGTCCCACAATATGGAAGAAACCCTGATCACGCTGGTTAAGAATATGCAGTATTAATCTCTTATGTTATGTTTAAGAAAATAAAAGTATGGGTACTGTTATTACCCGTCAATTGTACGATGGTCTCAGTTTGGTTCAGTTTAACTTGTAACATCTCTTGATATATACAAGAGATTCTCTTTGTCTAGCTATTTATGTGTACCTTGTTTTCCTAAAAAACAAATAAATAAAAAGATTTAATAATAAAAAAAAAAAAAAAAAATAG | |||||||||