| mature miRNA: TTAGATTCACGCACAAACTCG species: Citrus sinensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|188436234|gb|EY656660.1|EY656660 CS00-C1-100-123-C05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ TTAGATTCACGCACAAACTCG EST sequence (targeted fragment marked with yellow): CCACGCGTCCGTTCTCCATCTCTGCCCTGTAGTGTTCTTCGTAGCAGCACGAGCTTAGCTGGGTATCGAATTCAAGGAGAGGCATGTTTCGGGTTTGTGCGTGAATTTAATAAAATAACCGCTTCTTTTAATCTCGTTCCCCCATTTTTTGTTAGTAACAAATTTTTGCCGTCAGTGTTAGATTCACGCACAAACTCGTGATGTGTCTTTTCTTTTACGATTTCAAGTTTCGACCTTTCTTCTTCTCTTTATTGTTTTCCTTTTTCAATTTTTGTGTTTGTGTATCACTGCATCAATAATAGTGCGTAAAATGCAGCTGAGCCTGAGATGAGGAGACCGATTGAGGGAGAAAGATGGAGACTTTTCGGAATTAATTACTCGGCTTCATCTCAGCTTTATGAATCTGAAGTATTTGGTGAGCCCGGTTTCTGAAATGACCTTGCACGAGATGTTTGAACTGCATATGAGGTTGTTTGAACTGCATATGAGGTTGAAGCATAACCAGCATGGCCTGGCAATTCAGCCTGAAAACCTCTTTGTTACTCTTCTGGGGGTGCCCTTTGTGACAGTAATATGGATTGGCATTCAAAACCTTGTGTTGAATTGAGACAAGTACTTGCATTATGTTAGATTCCTGTGGATTCCACTGATGCTTTTCGTCTGAATCCCTCATGCAGTNCCACCAGCTATGACTGACATTGATGGNTAGAANGGTCAGAAAAACTGTGCATCTCGATGCAAATTTGGGTTCAAATCAAATCCATAGCATGATAGAAGATCAGCGGACGCGTAACTGGGTAAGTGGTAGGAAAGATATGTCAANGAGTAACAGCATGACAATNAGGGGTACCTTCAAANCGATAGTACAGCTCTCATAAGGTCATTCTTTCTGCNGAG | |||||||||