| mature miRNA: TGACAGAAGAGAGAGAGCACA species: Citrus unshiu database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209928161|gb|DC890645.1|DC890645 DC890645 GSA Citrus unshiu cDNA clone GSA0590 5', mRNA sequence TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GTTTTTATCGAAACTAAACCGGACCCGACATTTCTGAACATAGTACTTTTGTTCTGTCTGTTCTGTCACTTCCTGTACTTTCACTCACTTCCCCATTACATAGCATTTACATAACAAGTTAACAACCTCCGCTCAAGACTCAGGTC | |||||||||
gi|209932885|gb|DC895192.1|DC895192 DC895192 WFY Citrus unshiu cDNA clone MWYF532 5', mRNA sequence TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GGCCTGTTCTATTTCTTGCAAAAATTTATCATAATCCAGGAACTCAAAAACTCCATCATCCATCAAGGCATCAACCAGAACACAAAAAAGAAGGAAAAAGAGGGGAAAAAAAGAAAAATGGCAGCCTCATCCTCCTTGTTCACACCCTCCACCATCACCGTCCGAAAACACCAAATTTCACCCTCCAGCATCTCATTCCAAGGCCTAAGACCCCTCAACACCAGGGCCAAAACCCCCCTCCCCAAGCTCGCCACCTCCGCCAAAAGAAACAGCTTCGGCGGCATTAAAGCTGAGCTGAACACACCACTTGTCATCAGCCTCAGCACTGGCCTCTCCTTGTTCTTGGGCAGGTTCGTCTTCTTCAACTTCCAAAGAGAGAACGTGGCCAAACAAGGCTTGCCCGAGCAGAATGGAGTCACCCACTTTGAAGCCGGTGATGTTCGTGCCAAGGAATATGTTAGCCTCCTCAAATCCAACGACCCAGTTGGCTTTAACATTGTTGATGTTCTCGCTTGGGGTTCCATTGGCCATATTGTCGCTTACTACATCTTGGCCACCTCCAGCAACGGCTATGATCCCAAGTTCTTTGGTTGATTTTGTTATTTGTACTGTCTCTCTTTTGTCTCTTTTAGTTTCTTAATTTCTCAAGTGTTGCGCTTTGTATAGTTAATAAATTTCCTAGCATTTAATGGATGAGACCGATGATGT | |||||||||