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mature miRNA: TGGAGAAGCAGGGCACGTGCA
species: Cynodon dactylon
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|209859730|gb|ES302023.1|ES302023 _22Z_H12 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence

TGGAGAAGCAGGGCACGTGCA
|||||||| |||||||.||||
ACCTCTTCTTCCCGTGTACGT

EST sequence (targeted fragment marked with yellow):
AGCCAGATCGACTGCACTGTTGAGAGATGAGAGACAGGCGTATTTCTGCCATGTAGCGGCAGCAGACTACAGGGGTACGCGTGGTCTTTAAATTAACCGGTCTTCAAAGCCTTATATAACAGGTGGCTGGTGTGGAAGACGACCAAGAGGACTATGGGAGAAGAGGCACAGTACATATGGTCGCCGTCTCCCGTCTCCGGCATGGAAGCTCTTGTGTCCCAGTGGAGGATGGCGAGGTGCGCGAGGTGGAGAAGCAGGGCACGTGCTTGCTTGCTTGCCCCTTCTCTAGCCGGTTTAGCATTCCGGCCGGCCGGCAGCGATCGAGCGAAAGGCTTGGTCGCCGGCCGTCAGGCTTGCTAGCTCATGGAGCCAGCTGATGCATGTGCCCTTCTTCTCCATCGTGCATGCCTCGCCTGCGCATCTTTTGTACATGTGCATGTAAGAAAGGTAACTCTTGAACTTCGATCGGGTTCCACGCTCGTCTTCAGAGGGTTTATTTGGACGAAGCAGCAGGATATGAGTGCTCTATCGGCTTGATCATCATATCAATATTGCTTCTCTATTTTACTCAACATATTTTTGATGATTTTATGAGGTTCACATACATGTGGCAGCGGTGTGTTGGCAAGTACTAGAATCACACTGTTACCTTCATATTTCTTTTTTATATATTATTATTTTCTTTTATTGATATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGTCGGCCGCCTCGGCCCA