mature miRNA: TCCCTCTGTCCCAGAATATTT species: Eragrostis curvula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|166001288|gb|EH186128.1|EH186128 EC01_d_3805 EC01 Eragrostis curvula cDNA, mRNA sequence TCCCTCTGTCCCAGAATATTT EST sequence (targeted fragment marked with yellow): CCCCCGCCCTCAAGATCGAGGAAATCCCCGACGACAACGATGGCTGGATGTGCCGCCATCAGAAAGGTCTCATCCCTTTTTATGACACACGATGGTTCTGGAGTTTAGATTCAAGATGGTTTAAAAGTTGGGATATCCTTTTACAAGGTTTCAGTCTATTGGGCTTCTACATCACTCCACTCTGAATGAATGTGTAGTTATTTAGCAGAGTTCTTATAGATCCATACTGTTTCTCCTCAGATTTGAGGGACACGAGGGGTTTAACGATGCTGCATTTGCCTTCCATTAGAGACCTGCATTTACTGCATTCTGCTATGCTACTGAAATCATTAATAATCTAGTAGCACGTATGCTTCTCTGCACTAATAATACTGTTGCACTGACTACCCTGCATTTTCCTCTCTCCAGGCTTTTGCCAGGGGCAATGGCAAGGGAAAGAGGAAGGAGCTTACCCCGCAGGATGCTGCATTGCTCATCCAGATGAACTACAGGGCTCACCTTGCTCACCGCTCCCAGGTGCTCCGCTGCCTGCGTGATCTGGCTGTGGCAAAGGCCAAGCTCAAGGAGATCAGGTCCATGTTCTATAACATCTCTTACAGGCGCCGCATTGCGCATGACCACGAGGAGCGCCAAAGGTTCTCTGAGAAAATCATTGTCCTTCTCCTTACCGTGGAAGCGCTCGAGGTGAACCACCTGTTTATTATCGCTGCCTTCTTAGCATTATTGCAAGTTCGGTCGTTTCCTTTTTTGGTCTTGACTCCTGCGGTTGATTTACTAGGCGTCTTCATATAAATATTAGTTTCTACTCGTGCATCTGAAGTTATTGATTAGTGATACTGTTGCTTTGTTGAGAATCTCCGAGAAGGGTACAAGGATTATCGAGCTACTGTTTGATATGGATCCCCGTTATCATGCAATGCCATGTACTCCCTCTGTCCCAGAATATTTGTCATTCTGGCTTTTTACCAGATATGGACAATCTGTACGTCCAGATTCATTGAACATTCTATGAATCCTGGACCCTCCAAACACTCCCAGAATGACAATTAAACTGGGACGGAGGGAGTAGTAAGTTTATTTCCGACAAAAATAACTTTATCGCTTGAAATGACTTTTCAACCGAAGGGAAAACAAATTTTATCCTAATAAATTTTGTTCCCACCAGGGTCTTAAAAGGACGCTTTTTGCCTTCAAAAATTGGTGGGGTTTGAATGGAAAATTAT |