| mature miRNA: GCCAAAGGAGAGTTGCCCT species: Eucalyptus globulus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|224179895|gb|GO248292.1|GO248292 EgTS_7D6 Eucalyptus globulus C14 clone shoot apex under hydric stress Eucalyptus globulus cD GCCAAAGGAGAGTTGCCCT EST sequence (targeted fragment marked with yellow): ACTTGCTCTTTGACAGCCTCTCCTCGTAGATATCCAGAACCTGACAGAGCTTGTCCTCGCTCTCTTTGAGCTGCTTCGGATCCGGGGTAAGCCCAATGAACGGGCCGTAAACAATTTTGAGGACAAGGTGGTAGATTGGCGGATGGAAGTTCTGGGCCTCGACTTCGAGCCACTGCTCAACGAGCCCCCTCTCCTCGATTGTCTTCCCCAGCAGTTCAGTCCCTTGCTCCTTGTATTTCTCGGCATAATACCTTATGATGGCCCGCGATTCGAACAGAGTGTAGTCGCCATCTTGAACCACAGGAACCGATCGGAAGGGCTGGAGCTTGAGGTACAGGAGGGAGGGTAATCTCATTTGGCCTCTATTATTGGATCACGTTCGACCCGATATGAGGATAGCATGGGAGGAGCCATTTGGTCCAGTTTTGCCAGTCATCCGAATAAACTCTGTTGAAGAAGGAATTCACCATTGTAATGCTAGCAACTTTGGTCTTCAGGGGTGTGTCTTCACAAGAGACATAAACAAGGCGATACTGATTAGTGATGCAATGGAGACAGGAACTGTTCAAATAAATTCTGCCCCAGCTCGAGGACCCGATCACTTTCCTTTCCAGGGCTTGAAGGACAGCGGAATTGGTTCCCAAGGCATTACCAACAGCATCAATATGATGACGAAGATCAAGAGCACCGTTATCAATTTGCCGTCACCTTCATACACAATGGGCTAATCGGTCGCGACTCACAGGTTGGAGCAGGTGGCGCTGATTGCCTTGT | |||||||||
gi|162322782|gb|ES594973.1|ES594973 000001603252_F01.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRN GCCAAAGGAGAGTTGCCCT EST sequence (targeted fragment marked with yellow): CATTATAGAACAAGTTTCGGGTCCGCGATTCCCGGGATTGAAATTCGACCCCTTTAAGTCCGAAATCGAATTGGGTACACTCCCACCACCTCCTCCTGCAGAACCCTAGGGGGAAAAATGAAGGCTTCCCTGAAGTTCCGGGAGGACCAGAAGCCGCTGATCCGGGCCAAGGTCCCCCTCAGCATCCTCGGCCTCCCCTTCCAGTCCGGCGTCGTCGCCGGCGAGCCCCGGGAGCTCGCCCTCAGCCTCGGCACCTTCTTCGACTCCGGCCCCGCCCTCCGCATCTCCTACCGCCCCAACGACTCCGCCAACCCCTTCTCCCTCGTCGTCCGGACCGGCACCGGCCCGCTCGGCTCCCCGACCGCCAGCTCCATGTCCATGTCCGCCGAGTTCAACCTCGTCCACCGCGGGAGCCCCCGGTTCATGCTCCACTTCCGCCCCGCCCTCGGGGACTTCTCCGTCAAGAAGCTGCAGTCCTCCGAGAGGCCCGCGAAGCCGGGGTTCTGGGGCGGCGGCGGCGGCGGCGGCGGCGCTGGCGCCCGCACCGTCGCCGCGGAGGAGGAGGACGCCACGATCGAGGTCGTGGAGGCGCTCGCCGCGGTGAACGGCGGGGTTCTTGGCCGGAAAAGTCACTTCTTCGGGAAAAGAAAACCGTCCTGACCCCCGGACTCCCCGGCGGGGATCTTGTCCGGGTTGCTGTCTGGAATGTGTTGTGGCTGCCCTCACAAGGTGCCCCGGTGAGGAGGCACCTCTCCTTTTGCTTCTCCTTTTGCGGGATTCGGGTCTCCGAGAAAAAATAGTCCTTTTCTATTCTG | |||||||||
gi|162328456|gb|ES590104.1|ES590104 000001601152_I02.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRN GCCAAAGGAGAGTTGCCCT EST sequence (targeted fragment marked with yellow): TGGCATTAGACAGTTTCGGTCCGGAATTCCGGGATGGCAACGAAAAAAAAAGGTCGAAGTCAAAGATTTTGAATGGCCGATGAATATAGGTGAGAGTACACACTGAGCAAACCAGTTTTAGGGCTTCTCTACTTTGGCAACACATGTCAATGATGACGACGACGGAGAAGTCGAACGGATGCCGTCCAGTCATCGACGACTTGCCAAAGGAGAGTTGCCCTTTGACTGCTTCTGCTTAACGCGATTCGAACTCGAAGGGTCTTCGAGCTTTTCGTTCGTACATGGTGAGTTTCTGCATTGATGTACGACGTGTGCTGATATGTCGAGCTTTGTTCTCTGCTTGGGTTGAAACCGCATGAAATATCGACGTGACATCCTCCAGCCACATCTCTGCATTCTCAATGCATGAGTGACAATAGTAATAGTAAACACGAGTATAAAGTATGGATGAATTGAATTCGGACATTGAGTAAGCACGCTACATCTCTTTGTGAAGATGTAGTAGAATGACATCGATGTATGGTGCCTGCCTAATCACCAACTTAGCGATGACCATCTTTTTAACTCGACATACCGAGAATTAGTTGGAAAAATCTGTAGATTTGGCTTGTGGATCTGTAAATCCCCTTAGAGAGAGGGATCTATACTTTGAATCGGGCTGATACCACTTCTAATTTTTGCGATAAGGTATTCGGATGATAACTATCTCGCGTCCTTTCAAATGTAATGATCTTTATGCAATATGAATTATTTTGAG | |||||||||