| mature miRNA: TCGCTCCTCCTTCTTCTTCCA species: Eucalyptus globulus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|162328840|gb|ES591706.1|ES591706 000001601952_L07.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRN TCGCTCCTCCTTCTTCTTCCA EST sequence (targeted fragment marked with yellow): AAAAAGGGTTTTCGTGTCCGGAATTCCCGGGATTCTTTCTCTCTCTACTGAGCGATCCTCCCATGAATCCCCGCGGCGCCGCGCGTCGATGACCGTCCGATCGATCGGCCTCTCAAGACCGCCGCCGCCCTCCGCCGCCGCCGCCGCCGCCGCCGCAATGGCCGCCTCCCTGCTGCTCCCCGACCTCGCCTTCATCTCCTCCGCCCGAGCGGGGCGCGGCGGCCCCGTCCCCGTCCCCGCGCGCCTCCGCCGCCTCTCCGTCTCGGCGGCACGCTCTCTCTCCTCCCGGACCGCCTTCTCCGCCGGGAGGAGGAGGAGGAGCGCCGGAATCGGAGTCCGGGCCGGAGTCGCGAGGGAGGAGGGCGTGCTGCCTCCGGAGACGCGGGACGGCGAGCTGGTCGAGAAGCTCAACGGCTACTCCTCTAACGGCAACGGAGCCGCCTCGGCGGGCGGCGCCCAGGGGTGGAGGCGACAGTGCCTTTTCGAACGGTTCCGCTGGTTACTACTATGTAGGAAATCGGGATCGCGGGGGGGCAACGGGAGCTTTGGTGAAGTACTGGGAAGGGAAATGGCGCGGTCGACGACGGCAACCGCTACGGACAACTGCGGAATGAACTGGTTCAGGTAAAGGGACACTGGTGTGTGGCCAATGAAGAAAGGGATGGAATAGGAGGATTTAATCTAATTTGGGGAAAATATGCTGCCTTCGGAATCTATTCAAATATGGGTATCTCTATTTTTTGTTTATTTGTCTTCACACCCTTCTGACTCTCGTATACGAATTATATATTTAATAAATTCAATTTTATACCCTTTCTATACTGAATAAATTGTGCATCATACTTGGCTTTATTTTTTTTTTTTGTTTACTTTCCTTATTCTCTTCGTAGTCCGCTCGTTTTGTTTTTTCCCTCGGAAAATTACTAATGTAATTAGATATTTAT | |||||||||
gi|162326379|gb|ES594789.1|ES594789 000001603052_M02.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRN TCGCTCCTCCTTCTTCTTCCA EST sequence (targeted fragment marked with yellow): CTAATAGGACAAGTTTGCGGGTCCGGATTCCCGGGATCGCACTTCTAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGACGAGGAGGAGGAAGAGGAGGAGCGATGGCGAGGGACATCGACGACCTGCCGAAGAACGCGGCCAACTACACGGCCCTGACGCCGCTGTGGTTCCTCGACCGGGCCGCCACGGTCCACCCGGACCGGCGGTCGCTCGTCCACGGTGCCGTCGCCTTCACCTGGCGCCAGACCTACCGGCGGTGCCGCCGCCTGGCCTCCGCCCTCTCCCGGCGCTCCGTCGGCCTCGGCAGCACGGTCGCAGTGATTGCGCCGAATGTCCCTGCCTTATTTGAAGCTCATTTTGGAGTTCCAATGGCTGGAGCTGTAGCAAACTGTGTCAATATACGTCTGAATGCACCGACAGTTGCTTTTCTTCTTGGCCATTCATCTTCTGTAGTCATAATGGTGGACCAAGAGTTCTTCCCTTTGGCTGAGGAAGCTCTGAAAATATTAGCAGAAAAGAGTGATAAAAATTATAAGCCTCCACTTCTGATTGTTATAGCTGATGAAAACTGTGACCCAAGAACACTTAAGTATGCTTTAGGAAAAGGGGCAATTGAATATGAGAAGTTTTTTGGAAACTGGAGATCCAGATTTTGCTTGGAAACCACCAGAAGATGGAGTGGCAGAGTATTACTCTCGGTTATACATCTGGTACGACTGCCAGTCCCAAGGGAGTTGTATTGAGCCT | |||||||||
gi|162325928|gb|ES588696.1|ES588696 000001480052_P14.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRN TCGCTCCTCCTTCTTCTTCCA EST sequence (targeted fragment marked with yellow): GACCTATAGAACAAGTTTCGGTCCGGATTCCCGGGATCTGGTTCCCTCCATTGCTGCTGCTGAGAAGAACCACAGCTGCTGGAGCTTCTGCTTCTTCGAGCGCATTCACTTCCTTTGCAGCAGCAGCAGGAATTCGTGCGAGGAGAAGGAGGAGCTGCTGCAATCGAGCTTTGAGGGGGCCTCGCGAAGATGGTGAGGCTGTCGGCGGACTTGATCTGGAAGAGCCCCCACTTCTTCAACGCCATCAAGGAGCGGGAGCTCGACCTCCGAGGTAACAAGATTGCGGTGATCGAGAACTTGGGGGCCACTGAGGACCAATTTGACACTATTGATTTGTCCGACAATGAGATCGTTAAGCTGGAAAACTTTCCATACCTTAATCGGTTGGGTACTTTGCTTATAAATAACAATAGAATTACTCGCATCAACCCCAATATCGGAGAGTTCTTACCGAAGTTGCACACGCTGATTCTTACAAACAACAGATTGGTCAACTTGGCTGAGATTGATCCTCTTGCATCCCTTCCAAGGCTCCAATATCTTGGTTTGTTGGATAATAATGTCACAAAGAAACCCAATTATAGGTTGTATGTGATTCACAAACTAAAATCGCTTCGGGTGCTGGATTTCAGGAAAGTGAAAAGCAAGGAGAGATTAGAAGCAGAACAGCTATTTTCATCTAAAGAAGTCGAAGAGGAAGCTAAAAAGGAATCGACAAAGACGTTTATGCCGGGAGAGGCTCAAAAGGTTTCTGAACCCACCGAAGAACAGCAGGCTCCCAAAGTTGTTGCCCCTACACCG | |||||||||