| mature miRNA: TAGCCAAGAATGAATTGCC species: Eucalyptus gunnii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|167021451|gb|CU401287.1|CU401287 CU401287 LG0ABA Eucalyptus gunnii cDNA, mRNA sequence TAGCCAAGAATGAATTGCC EST sequence (targeted fragment marked with yellow): GGTCTCCATGGCATGACATGAAGTGAAGAGAGGCCAACGTAGCCAAGAATGAATTGCCAACAGAAATTGGAGACTTGAAAGGCGTTCGCATTGAATTCCTAAAGTCGCCGGCAATTCATCCTTGGCTTCATTCTCCTTGCTTCACAAATCAT | |||||||||
gi|103481266|gb|CT987797.1|CT987797 CT987797 Eucalyptus gunnii differentiating xylem AFOCEL clone 832 Eucalyptus gunnii cDNA, mR TAGCCAAGAATGAATTGCC EST sequence (targeted fragment marked with yellow): ATCTAGTAATCACGTGGCAGGAAGGTCGCAAGTGCATGGAACTCACAGAGGTCATGACTACGTGAATGGGAATAGCCAGTACCAAAATCACGGCCACTTCCAGGCCTCAGCATATTCAAATGAAAGGGAGAGAGATCGCTTTGGCCAGCAACCCAGAGAGCGTCTTCTCTAGCGGGGTTCACGAAAGCCTGCGTGGGCCCCGTGGTGCAGGTATTGAGCCCACCACTAATTACGTAAGAAGGCTGGTGGCATGGTTTCGATCCCGCAATTCTTGGCAATCTGTTTGCGGGGCGGCAATTCATTCTTGGCTTTTGTTCTTTGTGTTTATGGTGGCTTGTTGGATAAAAGGAGGTGCCGAGGAGGAGATGAAGAACATGGGCATGTGAGTTTCTGGATGTCCACTTTCTCATTTTCCCCCAACCTACCTTGTTCTTTTAGTCGTGTACAGGAGTAGGTCTCTCTGTTGTGAACTTTAGACCAAAATTTTAGCTTCCAGTCAGACAGAACATCCTTCTTAATGCTTGAATCTTAGGTCATCATAGCTCAGAAAGAATAACGACAATTTGATGAAAAAAAAAAAAAAAAA | |||||||||
gi|103478190|gb|CT984574.1|CT984574 CT984574 Eucalyptus gunnii differentiating xylem AFOCEL clone 832 Eucalyptus gunnii cDNA, mR TAGCCAAGAATGAATTGCC EST sequence (targeted fragment marked with yellow): CAAGTGGCAGGAAGGTCGCAAGTGGATGGAACTCACAGAGGTCATGACTACGTGAATGGGAATAGCCAGTACCAAAATCACGGCCACTTCCAGGCCTCAGCATATTCAAATGAAAGGGACAGAGATCGCTTTGGCTAGCAACCCAGAGAGCGTCTTCTCTAGCGGGGTTCACGAAAGCCTGCGTGGGCCCCGTGGTGCAGGTATTGAGCCCACCACTAATTACGTACGAGGGCTGGTGGCATGGTTTCGATCCCGCAATTCTTGGCAATCTGTTTGCGGGGCGGCAATTCATTCTTGGCATTTGTTCTTTGTGTTTATGGTGGCTTGTTGGATAAAAGGAGGTGCCGAGGAGGAGATGAAGAACATGGGCATGTGAGTTTCTGGATGTCCACTTTCTCATTTTCCC | |||||||||
gi|103474665|gb|CT981049.1|CT981049 CT981049 Eucalyptus gunnii differentiating xylem AFOCEL clone 832 Eucalyptus gunnii cDNA, mR TAGCCAAGAATGAATTGCC EST sequence (targeted fragment marked with yellow): CAGTGTTGATCTGCCAACACAATTTGTTAAGACATCAACTGCTCAAGGCTTTCAAACTAGGTCCATGAGAGCAGATTCAACAGGCTCCAATGGGAATGCTAGTGCCAATGGGCTCTCATACCAAGGTATAAGCTGCCTTGGTGCGGAGAAGGAAACCTTGCAGCTATATGAGGGCCCTAATGGGGCCTACAAATAGCTAAACCTCTCTACGTGGGGGTCCCATGGAGCTCCACATTGCTTGTGCTACCGTCTTTTATTTCCGGAAGAAATAGCAGATGTGTGCAAGGATATGCAGCTTTCCCGAGTGGAGGATCCTCAGTTTGCTGTGCTCCGGCAATTCATTCTTGGCTGATACGTGCTCTTTAAATATCTATGTTCTTCAGGAAGAGAGTTCTCACTGGCTGGCTTATCAAGTTGCCAGCCGTTGTCGTAGTGGATGTTTGAATAATCTCTCTTCTGTTCATGTTTATGTTTCTGAGGATTTCGGGACAAGGTTATTTATGCTGTCTTGCGTCAAACAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|167024166|gb|CU404112.1|CU404112 CU404112 LG0ABA Eucalyptus gunnii cDNA, mRNA sequence TAGCCAAGAATGAATTGCC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGATCAACTCTCTCTTTCACCGGACGCAACAGAAGTTGAGGGAAGAACGAGAAGAGAGAAACCGTCGGGGGAAATCATGCTTCTCGCAGTTCTCTTCGCTAACTCGGAAGGAAACATTCTCGTCGAGAGGTTCAATGGAGTCCCAGCCGAAGAACGGCTCCACTGGCGATCATTCTTGGTTAAGCTGGGAGCCGAAAACCTTAGAGGTGCAAAAAATGAAGAGCTCCTTGTTGCTTGCCACAAGTCTGTCTATATCGTATATACAGTGCTTGGGGATGTCAGCATCTATGTCGTGGGCAAGGATGAATATGATGAACTAGCATTGTCGGAAGTAATCTTCGTTATAACGTCAGCTGTCAAAGATGTATGTGGGAAGCCTCCAACTGAGCGTGTTTTCCTCGATAAGTACGGAAAGATATGTTTATGCCTGGATGAAATTGTTTGGAAGGGTTACCTGGAGAACACAGACAAAGAAAGAATCAAAAGGCTAATACGCTTAAAACCTCCAGTGGATTTTTGAGTCGAGTCAATTGCCTGTAATTGATTGAAGCCACTGAAGTTTCTGACCTATGGATGTTCCCAATGGTGTTACCAATATCCCAAAGCACAGGGATTTCCCTAGAACGATTTGGGATCTTGATCGAAAGATGTCGTGTTTGATT | |||||||||