miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGATAGAAGATAGTGAGCA
species: Eucalyptus gunnii
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|51555595|gb|AJ627729.1|AJ627729 AJ627729 Eucalyptus gunnii differentiating xylem Eucalyptus gunnii cDNA clone RTAB DNA-08C08,

TTGATAGAAGATAGTGAGCA
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AACTATCTTCTAACACTC-T

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCCCACAGTAAAAATTACTTTGTCGTGTGATATAAACAATTACAAGAGTAATCAAACGTACACATTATACACATACTCACCCAACTTCAACCAAAAATCTACAACACATACCAGGGTACTTCCCATTGCAAGCCTAAAAAATGTGATTGTTTTGATTATTTTCTTTTTCTTGAATGACCCTAATGATTGCTAATGCAAAACGCGAGGACACAAGTATAGCCCCCTAGCAATGATGGCGCATGAATCTTGTCTTATCCGTGACGGGAGCTCTGGCAGCTTGTTAGGGTCATAGTAACGAAACTTGCCTACCATATATAAATGGTAGGCAAGTAGTATTGGATAACGGCCCTCTCACAATCTTCTATCAAAATACATCGTGGCAAACGTGAGGCTTTCATGATGACGTAACAGAGTGACAAAGCATAGTCTCCCTGATTGCTCTTCTTTACCTTTCCTTAAAACAAAGAAACAAAGAAAATGTAC