| mature miRNA: AACCGAACCGAACCGAAAAAA species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76863914|gb|DV154907.1|DV154907 CV03096A2F05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03096A2F05.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): AAAATCNNNNNTATATATTTGGTAACAAAAACCGAACCGACCAATATCACCGATGTATTCTAAAAACTAAAATCAAAACCGAATCTAATAAACCGATAACCGAACCGAATAAGAAATATCAGTTGGTTCGGTCAGTTATTTCGGTTCGGTTCGATTTTTGAACACCCCTAGACTTATGAATAGTCGCAATTCTTTATATATGAAGTGCCATGAGAGATGTACTAATTACCTTACCTCTCACATTTACTTCAAAAGTGCATATTGTTTCTCTTAAGTAGTCTGCCTGTTCTTTTATGGGCGAGAACAACTAGAAAGAGATGAAGAAGATGATGAAATTGAGAAGGGAATCTAAGTCCAAAATCTTATGTGCAGTGAGTCATTGTCATTTTCTTAGGGCTGCATTTTTCGAGCCCAAGCCCATCTATGTTCATAGCAAGATGAATTGAACATTTTTTTTATATGTATTACCCGTTAAACCCATCAAATGCCTATTTTTTGAGGATCCATGGCAAGATTATATTTGTTAGTTGGTTCATTCCTAAAAGCTAATCCGTCCAACTTGAAACTTGATTATAATAACCCCAGTAATAATTAAAATTCCCAACTTCATTTAAATATCATACATAAAAATAAAAAATGCGT | |||||||||
gi|76860160|gb|DV151153.1|DV151153 CV03085A1F10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03085A1F10.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): CCGTTGCTGTCGCTTTCTCATTTAATCTCAACCATTTCTTTCCGAACGATATATTTTTTCTGCATTTTGAGACCCTTCTGTGGTTCAAGGATGTTGTTGCAATGAAACTAATATGTTTTGTTTGGAAAGGTATTTCAGTATGAGTTATGTTAGGTAATTTCAAGCTGGATTTTTATTTTTCTTTGGAGAAATTGAGCATACCTTAAATCTTATTGTTCAGTTGTTTCCAATTTAAGATCAAAATAGTTTCATGTGTTTCTTTTTGTCTCCCATCTCTCTAATTTATCAAAGAATCGTGACTAGGGCTGAGCAAGTTTCGGCAAAAACCGAAACCGGACCGAATAAGAGATTTGGTTCGGTTATGATATGTGTCTGGTTCGGTTCGGTTTTATTTTGGTCGGTTTTTTCTACTTCGGTTTGGTTACGGTTTTTATAAAAAAAAATCGGTTAGACCGAAACCGAACTGAAATAGTGTTTAGTTATAAAAAAACATATGCATAAATAGAGACTTTATATTGGGTCATACATGAATCATAAATCTGACCCATGCTCATTATAAAAAATATGACCCATGCTAATTGTATTATAAAAAAAATATGATCCATGCTCATTATATTATAAAAAAATATGACTCATGCTCATTTTTATAATACAATGATAGAGTAACCCTTTCAGAGTNNAAAAATATGACCCATGGCCATTGTAAAAAAATATGACCCATGCCCATTATAAAA | |||||||||
gi|76842327|gb|DV133325.1|DV133325 CV03067A1G09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03067A1G09.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): GGTGGGAGGCTTTTTTTGGTGAGCTTGGAGGTTTTCGGTTATCCAATTTTGGTCAGAGATTAATAAGAAATTAATAAGGGTAAGGATTATTTTCTGCTTTCATTTGGTTTAATTGAATGGGATTTGCTATATGGATCTACAGGTTTTGGTTTTAATACTGTTTTCTTTTATGATTGTGGTTTTTGTGGTGGCTTTTGGTTAGGGGTGAGCAAAACCGAACCGAACCGAACCGAAAAAACCGACAAAACCGAACTGAACCGAACCGGACCAAACCGGATCAAATTAAATTTCGGTTTGGTTCGGTTATGGATTTTTCAACATTTCGGTTCGGTTCGGTTTGGTTCGGTTAAAACCGAACAAACCAAACTAAATTTTTTTTTTGTATTTTTTTGTATTTTATATGTAAAAAATCCTCTTAAAAACAAAAATATTTCTTAATCAATACTCCCTCCGTTCCAAAAAATTAGACGCGTTTGTAGTTTTCTATTTGTTCCAAAATATTAGACGCGTTACCATATTTAAATTAATTTACCCATTGTTTTCCCTTCCTACCCCTCTATCTAATAAATGGTAATCATTTTCTTCTTTCCATATGAGCATATACAATTTAATGCAAATAGATTTTTTATATCATTTGCTTATTTTATTTTGGGACTAGAAAATCCTAAGAATCTACTGCATTTTATATTCTAAGTATTCCAATTTAATCATGCAAACTTATTTAGAAAAAATTTACATTGTTTATATAAAGAATAAAATTGAAC | |||||||||
gi|76843844|gb|DV134838.1|DV134838 CV03109B1G09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03109B1G09.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): ATATGCCTATATTCTTACCCATCCGGGAACACCGTGCATTGTAAGTTAACAATTAATACTCTGTCTTAGTAGGAGTAACTCTATAAATGGTGTTATTGTGTCAGAAATTAGAGTCTCTTATGTGCACCGGGTGCTTAAAAGAATTTTAAGCACCCTCATACACAAAATGACATGTGTATGATGTGTATGGGTGGCTACTTATAGGTCATCCATACACATGTCAATTTGTGTATGAGGGTGCTTTTAAATTAAGGTGAGTAAATCCGAACCGAAATTCGTAAACCAAAAAAACCGATTCGAATCAAATCGATCCAATCCGAACCATTTTTTGTTTGATATGGCTAGGATTTTGTTTTCAAAGTAGTTCGGTTTTCGAATTGGTTCGGTTCGGTTCAATCAAAACCGAACAATTCCAAAATTGAATTAACTTAGTTTATATTATTTAATTTTAATATTTTAGTGTATTAATTTTTTAGTTTTTTAAAAAAGAATGAAGTACACATAAATTCCTAATTAGCTTATAAATTTCGTAATTTTATAGTTTTTTCTTTAATAATCCAAACCGAATTACAATTTGGTATGGTTCGGATCATTGAAAACCATCTTATTCAGTTCGGTTCGGTTTTATCCGAAACAGACCATGCTCACCCCTGCTTTTAAGCCCCTTTTATCCCTTAGAATTTTTCCAAAAATTGGTATTGTACTATTTAGTTGCCACTTTTTTCT | |||||||||
gi|76599745|gb|DV115096.1|DV115096 CV03010B2A05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03010B2A05.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): ACAAACGAGCTAAACCAAAGATTTTTCGAGGATTGTACAGTTTTTATGGTTCAGGTACTGGGCGAACAACATCAGTCGAGTTTGACTTTGGTTCGGTTCGGTTCGATGTGTTGTGTTGGATTAATTTCAACATATTTATTTATTTTATTTTGTCTTGGATGAATACATGTGAAGCATCGTAATGGTGTATCATATTTTGTTGTTTTATATAGTACTAACCTGAATTGAAACAGATCAGAAATCTCAACTCTTGAACATGACATTTCAAATTAACAAAACATGAAGTATTATGCAAAAAAAAAAAAAAAAAATGCGT | |||||||||
gi|76842327|gb|DV133325.1|DV133325 CV03067A1G09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03067A1G09.f1 5, mRNA se AACCGAACCGAACCGAAAAAA EST sequence (targeted fragment marked with yellow): GGTGGGAGGCTTTTTTTGGTGAGCTTGGAGGTTTTCGGTTATCCAATTTTGGTCAGAGATTAATAAGAAATTAATAAGGGTAAGGATTATTTTCTGCTTTCATTTGGTTTAATTGAATGGGATTTGCTATATGGATCTACAGGTTTTGGTTTTAATACTGTTTTCTTTTATGATTGTGGTTTTTGTGGTGGCTTTTGGTTAGGGGTGAGCAAAACCGAACCGAACCGAACCGAAAAAACCGACAAAACCGAACTGAACCGAACCGGACCAAACCGGATCAAATTAAATTTCGGTTTGGTTCGGTTATGGATTTTTCAACATTTCGGTTCGGTTCGGTTTGGTTCGGTTAAAACCGAACAAACCAAACTAAATTTTTTTTTTGTATTTTTTTGTATTTTATATGTAAAAAATCCTCTTAAAAACAAAAATATTTCTTAATCAATACTCCCTCCGTTCCAAAAAATTAGACGCGTTTGTAGTTTTCTATTTGTTCCAAAATATTAGACGCGTTACCATATTTAAATTAATTTACCCATTGTTTTCCCTTCCTACCCCTCTATCTAATAAATGGTAATCATTTTCTTCTTTCCATATGAGCATATACAATTTAATGCAAATAGATTTTTTATATCATTTGCTTATTTTATTTTGGGACTAGAAAATCCTAAGAATCTACTGCATTTTATATTCTAAGTATTCCAATTTAATCATGCAAACTTATTTAGAAAAAATTTACATTGTTTATATAAAGAATAAAATTGAAC | |||||||||