miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GAGCCAAGGATGACTTGCCGC
species: Euphorbia esula
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|76601882|gb|DV117233.1|DV117233 CV03016B2F12.f1 CV03-normalized library Euphorbia esula cDNA clone CV03016B2F12.f1 5, mRNA se 

GAGCCAAGGATGACTTGCCGC
|||||||||||||||| ||.
CTCGGTTCCTACTGAAGGGTA

EST sequence (targeted fragment marked with yellow):
TGGAAGTCCGTCAGCCGGAAAAGCGTGGAACCACCGNGGCCCGGGCCCGCCACTTACTCAGATATGACGGGCCCATCAAATGGTGACATTTTTAATCNNNCGGAGTTCAAATTCTCCGGATACTCGTCTCATGCTCTGGCAGCTATGCAAGGGCGCTCAGCTGGAATGTGTGGGGGCCCGGGTCAGCACCGGGTTTCTGTCCTGTGATGGGAAGAGATCACAGGCAACCCTTCCGGGGCAGACCGTGATTTCAGAGACACAACTGCTTCGGTTACTATGGGAAGTCATCCTTGGCTCAGTTCGATTTCTATTTTGTTCCGTTGCATTCGAGGTTTTAGATTCTGAAAAACTAATTATCAGATTCAGATTATTGTTATTATTATGATTAAGTTGTTCAATTTATGGTTGCCATTAAAATACATGCCAAATTGATAACAAATTTGACTGGATTAACAAAAAAAAAAAAAAAAAATGCGT