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mature miRNA: GCTCACTCTCTATCTGTCACC
species: Euphorbia esula
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|76851513|gb|DV142506.1|DV142506 CV03131A2C10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03131A2C10.f1 5, mRNA se 

GCTCACTCTCTATCTGTCACC
||.|||||||||||..| | |
CGGGTGAGAGATAGGTATTAG

EST sequence (targeted fragment marked with yellow):
AGATTCGAACTTTGGCAAGAAAAAGTTTTCCCATCCGAGGTCCAAATGCAAGAAGCCGCAAAGCTCGGGGCAATGCAATGGGGCGTAATAAACGAAGGGGTAGCAATAGAGAGTTATAAAAACATCACGGGTCGTGAAGTTAGTTCCTTAGGGTTTGCAATCCATTCTTCCCAGCAATTCGAATGGATCGGGGCTTCCCCAGACGGGCTTCTCGGGGGGTTTCCGGGAGGTGGAATCTTGGAAGTTAAGTGTCCATTCAATAAGGGGAAACCCGAGGTTGGTCTCCCATGGAAAGCTATGCCTTTCTATTATATGCCTCAAGTGCAAGGGCAATTGGAGATTATGGATAGAGAGTGGGCGGATTTGTATTGTTGGACCCCGAACGGGAGCACGATTTTTCGGGTGAATAGGGACCGGGATTATTGGGAGCTAATACACGGGATTTTACGGGAGTTTTGGTGGGAACATGTGATTCCTGCTAGGGAAGCTTTGGTGCTTGGGAGGGAAGAGGATGCGAGAATGTATAAGCCTACTTCTACTCATAGACAGACGGGTTTCGTGATAGTTAAGAGCTTGAAATTAGCTAATGAATCCAAGTTGGTGTGCCGGGAGATTGCGGGGCATGTTGAATTTTTCAGGTGATGGATCAAAAGTTTTAACCTGCAAATGAAGGAGCAGGATCAAGTACATAGAATAGAATTAAGAAAATTGATAGGAAGATCTAAAAGTTTCTTATCTATTGGATGATCACTTNNNTTTTATAATCCTCATTCATTAATTAGCCA


gi|76866458|gb|DV157451.1|DV157451 CV03105A2G02.f1 CV03-normalized library Euphorbia esula cDNA clone CV03105A2G02.f1 5, mRNA se 

GCTCACTCTCTATCTGTCACC
||||||||||| |||||||||
CGAGTGAGAGA-AGACAGTGG

EST sequence (targeted fragment marked with yellow):
AAGGCATATGCACAGATGATGAAATGATAAGGGTACAGGGCGGTGACAGAAGAGAGTGAGCACCCATGGTCTTTTCCTGCATATATCATTTTATGCTCGAAGCTATGTGTGCTCACTCTCTATCTGTCACCCCCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGATTAGTTGTTATTGATGATTTGATCCATCTTACTCACATGCATATATCCTTTCTTTCTTTATAATCTTATTAATTAGCTTGGGATATCAGAGATCTGATCTCATCTCATCTTATTCTCTTGCGTTTCATTATTCACATTTAAAAAAATCTCTCTTTAGATCATCGATCGGTTAAAGTATATTATTATAATCAATGATCATAAAAAGTCTTATTATGGTTTGCATAGTTTAATCATAATAATGATACTCCCTCCAATAACAAACAATTAGTCGCTAGGAGTATTTGTTTTCATCATATATATATATATCTATCTAGAGTAGTAATTGGTTACATTAAATTATATATGTTTTTGTGAGAGAAGCATGGAACATTCTTGTTTCTGGTCCTGCTACAAGGAGACATGACTATTTTTCTTCAAACACAATTTTACATGCTTTATTTATATTTATTATGTATAG