| mature miRNA: GTGACAGAAGAGAGTGAGCAC species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76844856|gb|DV135850.1|DV135850 CV03112B1E05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03112B1E05.f1 5, mRNA se GTGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): AACAAANNNTTAAAGAAACAATCGCAGGTTAGAAAATGGAAAATGAAGGCCGCCACGTGTACGGCGTTCACAGTGACCGTAGCAAATCCCAGATGACCGCCGATTGGGATTTATTGGGCCCCTTGATTAACACTACAAATCTAACCCCCGCCGCCGGAGCCGACACCCAAAGTACAATCTCCATGTATACACCGGCGGCGGCGAGTATGGATGATACCGGAAACTACGAGCAGCTCAGTCTTTATAACGGTCGCCGGGAAGGGTTCAACTTGCAGCCGGACTCGCATCTGATGTGCTTAAAACTTGGGAAGAGGCATTATTTTGGGGAGAATTTTCCGGTGATGGGTGAAAGGGAAGTGGCGGCTGAGTTGTCTGTCGGTAAAAAGGTAAAACCTAGCGGTGGTCACGTGTGGAGATCCTTGCCGGAGGCGGTTGTGCCGAGGTGTCAAGTTGAAGGTTGTTATGTGGAGTTGGGGAATGCTAAAGATTATCATCGGAGACATAAAGTTTGTGAGATGCATTCCAAGGCTCCCAAGGTTATTGTTTTAGGGCTTGAACAGCGATTTTGCCAGCAGTGTAGCAGGTTTCATGTGGTGTCCGAATTTGATGAGTCAAAAAGAAGTTGTNNNAGGAGATTAGCAGGTCACAATGAGCGAAGAAGAAAGGGTAATCTAGAATTCATTTCCAAAAATTCTTACCACGAATCAGAATCAGCCAATGCTCTCTCTCTTCTGTCAACAAATCCCAAATCTTTCATGGAAGAATATTTCTACAACATC | |||||||||
gi|76841467|gb|DV132465.1|DV132465 CV03063A1E10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03063A1E10.f1 5, mRNA se GTGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GCAAAATTAGGAGGTCAACTCGATTTTCCCGGCACCGAGATCTCGGGTACCGGTCCACCCATGCTTCATCTTGATTCCAAGAACTTGTTGCCGTTCAAACCCAAAGTCAACCCTGCCCAAGGGTTAGAAGAAACAATAATCTCAAACAGTGTGGACGCTACTCAAGATCTTCATCGTGCTCTCTCTCTTCTGTCAACCAATTCCAATTCCAATTCATGGGGTTCGTCTTCAACCGAACCCAAATCAACCCTTAATCAAACCACCACCACCACCACCACCATTCCACACTCTCATTCTCTACTCCAAGCTATGCCTCTTTCTTCTTCTTCCCCTTCCCCGGATTATTGGAGAAGTACTCATCATCATCATCATCATCATCCCCAAGCTTCCGAGACTCGAGGTGGAGTTCATAATAGCGGCTTGGGTGCTTCTCAGAATGATTCCAACAATTACTTTCAAGAATTCCAGCTTCTAAGATCTCCTTATGACTCCTCTGACTTCTACTCTAGTCACTTGAACTGATTTTATTGGGAAATTTTATCTCCATTTTCGTCTTGAGAAGTTCACTCTCAAAGGAAGGAAATTGGATGGTTAAAAAGATTCGAAAATGCTGTTCAACTAGAATAATTTCGAGGTTGAGCAATTTCGAGCTACTTATCATGTTATTATAATTAATCACATTATTAGTCTAAGTTTGAACTTCTTA | |||||||||
gi|76860153|gb|DV151146.1|DV151146 CV03085A1F02.f1 CV03-normalized library Euphorbia esula cDNA clone CV03085A1F02.f1 5, mRNA se GTGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): GGAAGAATTTGATGAGGGTAAGCGAAGTTGTCGGAAACGCCTAGCAGGTCATAATGAACGTAGAAGAAAGCCTCAATTTGGAGGTCTCTCTGGAAGATCACATAGGTTGCTTCATTCGAATCATTCCTATCAAGGCACCAAATTTTTGGAGTCTTCCTTGCCAAAGAAGGCTTCTATCATTTTCCCAAATATACTACCAAGTAGTATTCTTTATTCTGATAAATATGAACAGGCTAACAACTTCTCTAGGCCTGTTAAATTGGAAGAGAAATCAATTTACTGTGCGGATGGACAGTTACTTCCAAAATCATTTCTCCATCTACATGGTAACGAGATCCAAAACACTTCTGGAATGTTCTCACCAGCCTCAGAAGATTTCACTCTTCTAAATGCCACGTCATCTATTCATAACTTATCTGGGGTACCCCATTCCAGTTGTGCTCTCTCTCTTCTGTCAACAGAATCACAGGACTTAAGCCAAGGAATTATAATGGCAAGGCCCTTTGTCACTCAACCTAATCGTTCCTTTGGGATAGAATCTTCCGGAAAGTATATATCGAATGGATTTCATTCAACTGATATGGACAACTCTATTAAACTTAACCATAACGGGTCCTTTATGGTTTCTTGTGGTGGGGATCTTCAAGTGGAAACAGATGGATTTATTCACGATCAAGAGACGGACTTTTTGAATTCCAAATATTGTGTTAATGGTGAAGATGGATCTACTGTGGATTTGCTTCAACTTTCTTCTCATCTCCACA | |||||||||
gi|76836333|gb|DV127702.1|DV127702 CV03048B2F08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03048B2F08.f1 5, mRNA se GTGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): TGAAACTAGGAAATTCAGGCGATTCGGGGGATAATTGGTTAGCGAAAATTTCGGTAGCGAGTGAGAGTTCGATGGATTCATCATCATCCGGGTCAATGAAACGGGTTAGAACCCTTGCAACCGGGAACCAAGTTCCATCTTGCTTGGTAGATGGATGCACTTCTGACCTTAGCAAATGCAGAGATTATCACCGCCGCCATAAAGTCTGCGAAATTCATTCAAAGACTTCCAAGGTTTTCATTAGAGGACAAGAGCAACGCTTTTGCCAGCAGTGCAGTAGGTTCCATTCCTTGGTGGAGTTTGATGAGGGAAAAAGAAGTTGTAGAAAACGTCTCGATGGACATAATAGACGCCGAAGAAAGCCTCAGCCCGATTCTCTAGCCGTAAATTCTGCTAGGTTATTTTCCAATCACCAAGGTACTAGATATTTGCAATTTGGTGGGCCCGAAATATTCTCGAGCACCAACTTGAACTCCGGTTGGCTCGGGCCGGTCAAAACGGAGAACGACCCAATGTTTTACGGTGATCAATCCTCTTTAAACATCGGAATTGGGAAAAAAAGTTTCCCCATGTCCGAGTCCCGTGGCTATAGAGGCGAAAAGAATTTTCCGTTCTTACAATGCGCGAGTTCTACATCTCCGGTTTGTCAATCGGTTTTCAATTCCGGTTCCCGGGTGATCGACTCGAACCGTGCTCTCTCTCTTCTGTCATCTCCACCGACCCAGACTCGGGAGATTAGCTTGAATCACATGGTGCAGCATGAC | |||||||||
gi|76845138|gb|DV136132.1|DV136132 CV03113A2G08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03113A2G08.f1 5, mRNA se GTGACAGAAGAGAGTGAGCAC EST sequence (targeted fragment marked with yellow): ATGGATGATACCGGAAACTACGAGCAGCTCAGTCTTTATAACGGTCGCCGGGAAGGGTTCAACTTGCAGCCGGACTCGCATCTGATGTGCTTAAAGCTTGGGAAGAGGCATTATTTTGGGGAGAATTTTCCGGTGATGGGTGAAAGGGAAGTGCCGGCTGATTATTATGCCAGTAAAAAGGTAAAACCTAGCGGTGGTCACGTGTGGAGATCCGTGCCGGAGGCGGTTGTGCCGAGGTGTCAAGTTGAAGGTTGTTATGTGGAGTTGGGGAATGCTAAAGATTATCATCGGAGACATAAAGTTTGTGAGATGCATTCCAAGGCTCCCAAGGTTATTGTTTTAGGGCTTGAACAGCGATTTTGCCAGCAGTGTAGCAGGTTTCATGCGGTGTCCGAATTTGATGAGTCAAAAAGAAGTTGTAGGAGGAGATTAGCAGGTCACAATGAGCGACGAAGAAAGGGTAATCAAGACTTCATTTCCAAAAATTCTTACCACGAGAAATTGATATCATCACCAGAATCAGCCAATGCTCTCTCTCTTCTGTCAACAAATCAGAATATTTGTACATCATCAGATTTGTCATCAAGATCAAGTGCTGCTCTTCGAGAACTAATTGCTGAACACCGAGCAGCTATTTTAAGTAAACATTTGCAGCACAATTCAATACAAGACTCTCCTAATAATTATGATCATCATCAATATCATCACACTACTCAAGCTTGTAATTATAACTTCAATAAAACTTGTAGTTCCTTCTTTTCAAATGATCATCATGACCACCGGTTCCAAGATGATGATGATGGGGCAGTGAC | |||||||||