| mature miRNA: TCAGGTATGATTGATTTCAAT species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76599680|gb|DV115031.1|DV115031 CV03010B1C10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03010B1C10.f1 5, mRNA se TCAGGTATGATTGATTTCAAT EST sequence (targeted fragment marked with yellow): ATTGGTTTATTAGCATTTCATTTTGCATTGCTGATAGTAGCCATCTTTTCAAGAAAACATATCAACTTCCAGATGTGCTTGTTTCTCCTAGCTTTGGGCGGTGTATACTTTGCTGAAAGGCTGAATAAAGTTCTGGCCAGCAACTGGAAGAGCTTTGCAAAGCAGAATTATTTCGATCCACACGGAGTCTTTCTTTCTTCACTCTGGTCCGGGCCCCTTCTCGCCATCTCAATAATTGTGTTGATAAATACATTGTCTTCCTTGTGTCACCTTATCGTGAGATGGAAAAGGGCGGAACTCAGACACCGGGCAAGAATGTCCCATAACAAACAGGAATAGGATTGATTGTGCTGCTATTTGAAGAGCTAGTTTGTGGCTCTAGGCAGTTTTTATAACAGTTAGATTGCAAACATTTGCTTGCTTCTTTCTATCACATAATTTATTTGACAATTTATTCGTTAGATGATATGAGAAATTTACGAGTAAACTAGAATCCTCCAGAATGGGAAGGAAGAGGACAATTATTAGTTTTGGTGATATACAATGGAATGAATGATACCTGATCCTTTCAATGTGTTTATATCTTTGACAGGAATGAAGAATATATTGTTTAAATTACTAAAAAAAAAAAAAAAAAATGCGT | |||||||||
gi|76840656|gb|DV131654.1|DV131654 CV03060B1H09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03060B1H09.f1 5, mRNA se TCAGGTATGATTGATTTCAAT EST sequence (targeted fragment marked with yellow): ATTTCTCAAATGGATTCAATCAAACCTGAAATTGATCNNNNTTTTTCTCCATTTATTAGAGTGTACAAAGATGGAAGTGTTGAAAGACTTATGGGTTTCCAAGTTGTTCCTCCTTGTTTAGATCCTACAACCAATGTTCAATCAAAAGATGTTGTCTATTCGCAACAACTCAACTTATCCTCTAGGCTTTATCTCCCTCAAAATCTCGACTCGAATCAGAAAGTACCTCTCCTCGTGTATTACCATGGTGGTGGTTTTGTCATCGAAACTCCTTTCTCCCCGAACTATCATAATTTCTGTAACAAGTTAGCTTCAGAGGCGAAGATCATCATTGTCTCTGTTGACTACAGAAGGGCACCAGAGCACTGTCTCCCGGCTGGATATGATGATTCATGGTCCGCCCTCAAATGGGTTGCTTCCCATTTCAGTGGAGATGGTCCGGAAGAGTGGATAAACTCTTTTGCGGATTTACATTCGGTTTTCGTGGCAGGAGATAGTGCTGGCGCGAACATAGCACATAACATTGGTATGAGATATGGGGAAGAAAGATTAGATGAGATTAATCTTGTTGGGGTGGTTTTAATTCATCCTTATTTTTGGGGGAAAGAACCAATTGGAAACGAG | |||||||||
gi|76842530|gb|DV133528.1|DV133528 CV03105B2H02.f1 CV03-normalized library Euphorbia esula cDNA clone CV03105B2H02.f1 5, mRNA se TCAGGTATGATTGATTTCAAT EST sequence (targeted fragment marked with yellow): CATTGNNNNACGCTGAAAGGTATTTCTTGGTGAAATCCTTAATCCTAATTTGATAGATGAAAGAATTGTGGGAATCCTTTTTCTGCTCAATTTGTTGAATTCAGCGAATCTTAGTTAACAAACTTTAGAACTTTTATATATATATATATATTATTTTTTAATTTGGAGCTTAATTATCTTTAATTGTATTAAGAATTATTATTTAATCACTAGATAGTTTGGGATAATCCTTGCTGCCATCTTCTTCACTATGTCTCTAACATGATTTATTTTCTTTCTCCTTTTCATTCTCTACTTTGGTATTCTAGATTTAGGTACTACATCGAGGTTTTGGGGAAGCTTAATCTTACTGGGTGTTGATTATTAGAAGTAGAAGCTAAAAACCAGAAATCAAACTTTGAGGTCAAAGTTTTAACTATCATTTTATACCGGTTGATATATTTGGAGGTTGATTTTTATTGGATTATGGCTCAAAATAGAGCCAATTTTATTCTTAAATCTACTTTTGGGATCTAGTTAAAAATAATCATATCTGATGGGTCTCTGAAATGGCAGGTGGGGTTAGTTTTCATTTTTTTATTGCCCAACTAGAACTTTAAATTCCGGTTGGTAATAACATATTATTATTTTTTTTAAAATTATTAAAAAGAAAAGAAAGCAAATGATGTCCCTATAAAACTGAGTTAATTGCTAC | |||||||||
gi|76844431|gb|DV135425.1|DV135425 CV03111A2E03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03111A2E03.f1 5, mRNA se TCAGGTATGATTGATTTCAAT EST sequence (targeted fragment marked with yellow): GGTGTCTNNGGTTTGAATATGGTTACTCCCTCTCTTCGCCTAATGCTCTGGTCATTTGGGAAGCTCAGTTCGGTGATTTTGCAAATAATGCCCAATGTATTATTGATCAATTCATTGCCTCGGGTGAGGTGAAATGGATGCAGAGATCTGGGTTAGTAATGTCACTTCCTCATGGCTATGATGGACAGGGGCCAGAACACTCATCAGGCCGTATGGAACGATACTTTCAACTTTGCAACGAGGACCCTCGCATCTATCCATCCCCACAAAAATTAGAACGTCAACATCAGGACTGCAATATGCAAATTGCTTATATGACAACACCATCCAACCTCTTTCATATTTTAAGACGGCAGATGCATAGGCAGTTTCGAAAACCTCTTGTAATATTCTTTTCAAAATCTCTCCTCCGACATCCAATTGCACGGTCGCCGATTGAAGAATTTACTGGCGACTCTCAATTTAAATGGATCATACCTGATCCGGAACACGGCAAATTCATAAAAAACCATGAGCAAATTGACCGAATAATTCTCTGCTCCGGTCAAGTTTATGCTGCTCTTTACAAACACCGTGAAGAAAATGATTTCAAAAGGACAGCTATCACTCGAGTCGAACAACTTAATCCTTTCCCGTGGCAGTTGTTAAAAGAGAACATCGACAGTTACCGTAACGCCAAAACTATTGTTTGGTGTCAANANGAGCCATTGAATGCCGGTGCATGGAGCTTTATGCAGCCTCGAATCGAAACCCTCTTAAATAAAACCGNNCATCACGATCGTAAGCACGTCATGTATGCTGGCCGCAATCCAAGCG | |||||||||