| mature miRNA: TGACAGAAGATAGAGAGCAC species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76839181|gb|DV130179.1|DV130179 CV03056A2A06.f1 CV03-normalized library Euphorbia esula cDNA clone CV03056A2A06.f1 5, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): TTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACCGGAATCTTTTTCTTGCAGGAAAAGTATGTATAATCATTGTTTACACAATGTATATGCATCCTAATTACATCTTTCTAAGCATCCATATGATTTAAAATTAAAATCAAAACATCATCTTTCAACGAAACTCTGGATCTTATATGCCTCTGTTTCGATAATACTACAAATAAGTCCACTTCCTACAATGTTGCAAACTTGCAATTTCCTTTCCAAAATAATCAAGTTTTATCTTTCATCTACAGTTTTTCTTACCCCTTCCGTAACATTTCCACAGGCAAAATAGGTACAATTTTCCTCTGATAAAGGGAAATACTTCTTCACAAAACTCAACTTACTATGAGCTACTCACTGTACCTCTATTTTCTGTCAATCTCCGCCACGTCATTTTCGCACAATGCAACAATGTTAAGGTTGCCACAAGGTAAAAAAAAGGAATCCCGACAACACATCCCCCAAATGCTAAATTTACCAGGGTCAGCAGTGCAGCACCAAAATGAACTATGGGGACAAAATACTGGTCCACTTTATTCCCTTCGGCATATCCTTTGAACGCAATGACCATTGAAAAA | |||||||||
gi|76865455|gb|DV156448.1|DV156448 CV03101X1C07.f1 CV03-normalized library Euphorbia esula cDNA clone CV03101X1C07.f1 5, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): CCGTTGCTGTCGCATGTGTATCCACCAATCTCCACGGAAGTTGAATCTGCTCTATATCTTCTGTTTTTGTTTCATTAGTCTCCGGTTCGATTTGTGTCAATGGAATCTATATTGAGTAACTCATTTAGGTTTGTTTTGTTGTTTCCAAGATCAATCCCTCCACTTTGCTGCAATTTATGAATGGTTTCACAGTATTTTTTTCTGAGTTTACAGAATCATTACTTTTTCTCAATATTGGCTCAATTTGAAATTTTAGGTATCGCAATGAATTCTTAGCATTTGTAATTTTTCCTGGTTAGACTAAATTTTGTTATGGGTTTTATTGACGCTTTTTAATGCTTTGAGGACTTTTGGTGGTCCTTTTGGTGTATTTTTAAGTTCTACCACATGAATGATGGGTGCCTAGGAACTCAAAACGATGCAACCTAAGAGTCAATAACACTTGGTAGCAAACTCAATGTAACATGAGGTTAGATTGTCGATGCATAGAAAGAGGAGTCATCAGTGCCACACTCCAATTTGACAGAAAACAATTGCTATATTCAGCATATTCTAAGGTCCGGTGATTGGAGACACTACTGAGTACCAGCTCCATTGCAAGCATTTGTTGCACTTATTAGGACAACAAAGATAAGGACTGTTTAGATTTAAGATGCGGATCATGGCATTCTTAAGACAATTAGTGTGACAAGAATAGAATTTGTGGTTGCTCTTGCAAATGAGTATGTTAAAAGATATAAGTGCTAACTGAGGCCAAGCTATCAC | |||||||||
gi|76853848|gb|DV144841.1|DV144841 CV03137B1H02.f1 CV03-normalized library Euphorbia esula cDNA clone CV03137B1H02.f1 5, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): CCACATTCCTGCCTTCTTTCAATAGTTTTTTTTGTTCACTTTTCCTTTGTTTTTCATTCATGTTTTAGCTATGAATTTTACAATTGTTAAAATTATATATTTTGTTTTCCACTTTTGTTTTGTTTTCTCTTTTTCATATACTCTCTGATTTGTCTCTTTAATTATATTTCCTCTTATTTCTATTTGTGACTGATGTTCAAATATGGATGGTTCTGTCTGAGATGGGTTTTTGAATCTCGGTTTGTTCTTATCGGTGCTATATATGTTCTGTCATTGGCGGAACCATTCTCCGTCTTTTCATTCCATGGGTGAAATATGCAGATCTATGATATAGGATACCGATTGATGGTTAACGTGGAAGCAGCTTGACTATTCCATAAATGGTTTGTTCTATTCTTTTTACTTTTCAATTCTTCTGCGTTTAATATGTGTTGATTTATTTCAAATGTGTTTCTTATGGGAACTGATTTCTTCTGCAAGGGTTAACACTGGGAAATTTCAGTAGATGTAATTTGGTTTACTTGCTGGTATATGGTTTCAAACCAGTTGGAGATGATTTGAGCTCTGGGATATTGGTTGGAGAATTACGCTTCCAATAGTGTTTAGTAGTTGTTGGGTTGATACTAATTTCTTTAAATTTCTTCTTATGGTTGATGTTTCTATGTGTTAGATATATAATTGTGTATAATTGTCTTTGTTCTTGGTTTTCAATGTTTTCCCTTTGATTTCCTTATTTCTGTGTTTATTTACTCCTTTGTCTTTAACATATGTTGTGGGTTTTTGGNNACATTCTCCTATTTGTATGATCTTTTGGGGATTTGCTTATAATC | |||||||||
gi|76844528|gb|DV135522.1|DV135522 CV03111B1E11.f1 CV03-normalized library Euphorbia esula cDNA clone CV03111B1E11.f1 5, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): TGGAGCTGTACTGATGGATACATGTAACTCCAGTGATGATATTGTCATATGCAATAAAACATTTACATACTCTCCATCACTCGAAGATGTGGGTTCCTATCTGGCATTATATTGGCTGCCCATTCGTTCAGATGGAAACTGCGGAAAACCATTAGTTGCATTTTCCAACTCCCCTGTTAGCCCAGGTACATTGTTACTGATGATTCTTTCTCCTAATATATTAGTGTTTCCCTAATGTTAATGACAAGTTTGCTTCTGTCTCTACCGAAAATCTGGGGAAGGTTATCTGGGACTAATGACCTTTACAAAGAGTAATTCCAATTCACCCTCCGGTTTGAACAGTTTGACCAAAACTGTTCAAAGAGGAAAGTCTGGTGCACTGGAATTACCCATTTAGTGCTTGACAAGAAGACTTGCCTTCTGAACAGGCTTAGCTAAAATATCGTTGAACTTCAATTTGCATTCATAATTTGAGTGTTTTGAAGTTTGTGATCTTGAGATGTGCATATATGTTATTGTTTCTTACCACATCTCTATGCTTGACATACTTGGTTCAAAAAAGCATATTTGTCCTGTTTATTTTCTGTCAGTTAATTATTGGCCATAGTTGTACCAATAAATGCAAAACTAGTAGCTACATTGTTTTTAACACGCATGAAATGAAATGATGTTGCAGCTC | |||||||||
gi|76847778|gb|DV138771.1|DV138771 CV03120B2H01.f1 CV03-normalized library Euphorbia esula cDNA clone CV03120B2H01.f1 5, mRNA se TGACAGAAGATAGAGAGCAC EST sequence (targeted fragment marked with yellow): ACCAAACTTCAATTTCCATGACCAGAACAACAAACAAAAATGAGAGAACTGTCCGCTTTATCTTCTCTCATTCTTCAATTTCCACTCCACAATTCATCTCCATCACCTGATTATCTCCTCTTCTTTCCCTCTCTATGGAATTCTTCTTCTCCGATTTCCCTCCAGAATGCCAAGATTCCGCTGGTTCCTATAACGGCGAAGGCTTCTCCGAGAGTCCGGTGCTTGACTAAATCCGCCGAAGAAAATCAGTGGATCGAACCGGAGAGTTTGAGTTCTGATGGCGGTGATGGTGGAGAAGTAAGGGAAGATGCCAAAGTTCAGCATCCGGAGCAGCTGCGGCAGCGGATTGTTGCTCCTTATAGCGATTCTCTTTCGCTTGGAATTCGTGAGCCTGTTTATGAGGTTGTTGAAGTCAAATCAAATGGCACAATATCTACTAGGAAAATAAACAGACGCCAATTATTGAAGTCAAGTGGCCTTCGTCCACGAGATATTCGGAGTGTTGATCCATCATTGTTTTTGACAAATTCAATGCCTTCATTTCTGGTTCGAGAGCATGCTATCTTGCTCAATCTGGGATCATTGCGAGCGATAGCAATGCAGGAGGGTGTCCTTATATTTGATTATAACCGTAAAGGAGGGAAAGCTTTCATAGAAACATTGATGCCTCGATTAAATCCCAAAAA | |||||||||