| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74169401|gb|DT639329.1|DT639329 00156 leafy spurge subtractive cDNA libraries Euphorbia esula cDNA clone RDP3A05 5', mRNA seq TGCACTGCCTCTTCCCTG-GCT EST sequence (targeted fragment marked with yellow): AGCGTGGTCGCGGCCGAGGTACTTTTTTTTTTTTTTTTTCGGAGAGAATAATTCCTTTAATATCAACAACGATACTATTAACAGCACAGGGAGGAGGCAGTGGAGAAACAGTTGGGCTTTCTTTCTCTACCCAGCCTAGACCTGAACAACCGAACCCCAACAGCTTACGAGCCACTCAGTGAAGAGGAAGGGAGGGGCTGGAAACCAAGGCTTGACACTTAAATAGAGCATGGCAAACCAGGAGAGGCCTGGTGATGAGGAGGGCTGAGGGCTGAGCAGCCCTAGCGCAGGTCTTCAGCGGTGAACATGCCCTTGGCCCTGCGCAGGATGGAGTCTTTGGCTGCATCGTAGGGATGCTCCTTGGACGGGATCTCCAGGACAGCTGGAATGGACCTCTGGTGGGCATCCAGGGCGTGCCGAACCATCTCTGCGATGCACCTGCCCTGGCGGCCGCTCGA | |||||||||
gi|76850928|gb|DV141921.1|DV141921 CV03129B1H03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03129B1H03.f1 5, mRNA se TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATTCACAATGGAGCCTCAAAACTCAAGTTTCTTGATTCTTGGAATTCTTTTGATTTTCGGTTTCTTATCAACATATTGCCAGGCTGAAACTCACTATCATGAATTTGTGATTGAAGCAAAACCAGTGAAGAGGCTGTGCAGAACTCATAGCACCATTCTAGTAAATGGCCAATTTCCCGGACCAACATTACAAGTGAGAGATGGTGATACTCTTGTCATCAAAGCGATAAACAATGCTCGATATAATATTACCCTTCACTGGCATGGAGTACAGCAGCTCCGGAATCCATGGGCCGATGGTCCAGACATGGTGACTCAGTGCCCAATTGTACCAGGAAGAAGTTATACCTATAGGTTCACTATTCAAAATCAAGAAGGGACTTTATGGTGGCATGCTCATAGTAAATGGCTTAGAGCCACTGTATATGGAGCTCTTATAATCTATCCCAAATTGGGTTCTCCGTATCCGTTTCCCATGCCCAAGAAAGAGATTCCGATTCTTCTTGGGGAATGGTGGGACAGAAACCCCATGGATGTCCTAAAGTTAGCAACTTTCACCGGAGCAGCCCCGAATGTTTCAGATGCTTACACCATTAATGGCCAACCGGGAGATCTCTATAGATGTTCCAGCAAAGAAACCGTGATATTCCCGGTGGCATCGGGGGAGACAATCCTCTTAAGAATAATAAACTCCGCAATGAATCAAGAACTCTTCTTTACGGTAGCAAATCACCAGCTNACTGTAGTAGCTGTTGATGCTGCATATA | |||||||||
gi|76857638|gb|DV148631.1|DV148631 CV03077A2B10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03077A2B10.f1 5, mRNA se TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): GAATGAACCCTAACCTGACCCTTACTGGTTGAGAACTTTCTATGATTTTGGTCCAGAAGAGGCAGTGAAGGTACCTAATTATGGTTTTTGTGGGATTTTGAGTCCATTGCTAGCTAATATTTGTCTAAATGAATTGGATCAAATGATGGAAGAAAAGATAGTTCAGTTTTTCAGGCCTAATCAGAGTGACTCAATATGGAAAGATTCAATTAATGATGGGTGTCACAACCCATCTTGGCCGGAATTTGTCCCGTCTAGTGGGAAAGAGAAGACTCGAAAAATGGATTACATTCGATATGGTGGTCATTTTTTGATTGGGATTCGAGGGCCTAGAGAGGAGGCAGTGCAAATCCGTAAAGAAATTATCGAGTTTTGTCAGAGTAAGCTGGGGATCAAGTTGGATAATTCGAAAATTGAGATTGAACATATAACAAGGGGAATAGAGTTTTTGGATCACATAATTTCCCGGAGAGTAATATATCCTACACTTCATTACACTTCAAGTGGAGGCAAAATAGTAAGTCAAAAGGGTGTGGGGACTTTGCTTTCAGTTACCGCTAGCTTGCAAAAGTGTATTCGCCAGTTTAGGCGCCTTCAATTTGTTAAGGGCGATAAGGATCCAGAGCCATTGCCGTGTAATCCAATGCTCTATTCAAGTCAAGCTCATTCCAATGCCCAAATGAACAAGTTTCTTGAGTCCATGGCAGATTGGTACAGATATGCTGATAACCGAAAGAAAAT | |||||||||
gi|76844619|gb|DV135613.1|DV135613 CV03111B2F02.f1 CV03-normalized library Euphorbia esula cDNA clone CV03111B2F02.f1 5, mRNA se TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): AAAATTTTGAATGAGAATGAACCCAAACCTGACCCTTACTGGTTGAGAACTTTCTTTGATTTTGGTCCAGAAGAGGCAGTGAAGGTACCTAATTATGGTTTTTGTGGAATTTTGAGTCCATTGCTAGCTAATATTTGTCTAAATGAATTGGACCAAATGATGGAAGAAAAGATAGTTCAGTTTTTCAGGCCTAATCAGAGTGACTCAATATGGAAAGATTCAATTAATGATGGGTGTCACAACCCATCTTGGCCGGAATTTGTCCCGTCTAGTGGGAAGGAAAAGACTCGAAAAATGGATTACATTCGACATGGTGGTCATTTTTTGATTGGCATTCGAGGGCCTAGAGAGGAGGCAGTGCAAATCCGTAAAGAAATTATCGAGTTTTGTCAGAGTAAGCTGGGGATCAAGTTGGATAATTCGAAAATTGAGATTGAACATATAACAAGGGGAATAGAGTTTTTGGATCACATAATTTCCCGAAGAGTAATATATCCTACACTTCACTACACTTCAAGTGGAGGCAAAATAGTAAGTCAAAAGGGTGTGGGGACTTTGCTTTCAGTTACAGCTAGCTTGCAAAAGTGTATTCGCCAGTTTAGGCGCCTTCAATTTGTTAAGGGCGATAAGGATCCGGAGCCATTGCCGTGTAATCCAATGCTCTATTCAAGTCAAGCTCATTCCAATGCTCAAATGAACAAGTTTCTTGAGTCCATGGCAGATTGGTACAGATATGCTGATAACCGAAAGAAAATAGTTGGATTTTTTGCTTATGTTATACGTAGTTCATTGGCTAAACTTTATGCTGCCA | |||||||||