| mature miRNA: TGTTCATTCCTCTTCCTAAAA species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76848692|gb|DV139685.1|DV139685 CV03123A2H05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03123A2H05.f1 5, mRNA se TGTTCATTCCTCTTCCTAAAA EST sequence (targeted fragment marked with yellow): AATCGNNNNATCCGAAAGAAAGAAAACCAAATTTGAAATTATTTTGATTTTGGGATGAGGAACGAACGAACAACTCTCCTCTTTCTTCTAATTTGATTTCTGTAAATTTTCAAAAAAAAAAANNNAAGGATACTTACTATGACACCCCCAAAACAGGATCAAAATCAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAACAAAGCAGCTTGGCTTCTTGGAATCCAGACTCTCAAGATTCTACCTTACCACCTCCCTCCTCCTGGTCCTCATGATGTTAAAGTTGGGATTAAGGCTCTTGGCATCTGCGGAAGTGATGTTCATCACTTCAAGACAATGAGATGCGCAAATTTTATAGTGAAAAAGCCAATGGTGATAGGGCATGAGTGTGCTGGAATAGTAGAACAAGTAGGCAGTGAAGTCAAGAGTTTAATTGTAGGAGACAGGGTAGCATTAGAGCCTGGAATTAGTTGCCAAAGGTGCAATCTTTGCAAACAAGGTCTCTACAATTTATGCCCTCTTATGAAGTTTTTTGGATCCCCTCCCACTAATGGTGCTCTTGCCAATAAGGTAGTGCATCCTGCTAATTTATGCTTCAAATTACCCGAAAACGTGAGCTTAGAGGAAGGAGCAATGTGTGAACCCCTAAGTGTCGGGGTCCATGCTTGTCACCGTGCTAAAATTAGTCCCGACACAACTGTTTTAATTATGGGAGCTGGACCCATCGGACTAGTCACCCTCTTAGCTGCCCGTGCATTTG | |||||||||
gi|76866417|gb|DV157410.1|DV157410 CV03105A2C08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03105A2C08.f1 5, mRNA se TGTTCATTCCTCTTCCTAAAA EST sequence (targeted fragment marked with yellow): CGACAGCAACGGGTACAGTCCCTCTGAGCACCACGTTGTTCATTCCTCTTCCTAAAATGGCTTCTCTTCATTCTCTGAAAAATCAATTGAATTCATTTTAGGAAGGGAATGAACGCTGTGCTGGTATCAGAGTGTTATCCTCACATCTGATAATTGATTATTCATTTTCAGATCCGGTTTTCTTCTAATCTGAACCAATTTCCGGAAGAGGAATGAACAAGAAATTTTCAATTCAATGAATAGTCTGTCTTCTTCTGGTTAAAATGAAACCGTCCAAAATGGCAGTGAGGTTTCTAAAGCTCCCCCTTCTCTCCCGCTGCTCCAAATCATACCCTTCTAACCTCTCTGATGGGTAAAATCAGAAATTCAATGTTCGTCCAGATGCTTCACTGTTGCAAAAGCCGGAAAGATTCATATGCCTAAAAAGTCATACCTGCTGTTGTTAATATTATGAAGGAAGATGCAACACTAGTCACCCTGATTAAGCCCCAATTTGAAGCTCGTAGATCGCAATGCCCAGCCACCAGATTGGACCATGATTCATCGAAGAAATCTGGTATTGCTTTCCATAATCTCTTGAAAGAGTCTAAGAAATCTGGTTTTGCTTTCCATAATCCTTTATCCTTGTTCATGATATCATACTCTTCTGGGTTGAAGTATTTTGCAATTTCCAGACAGTAGAGAGTATTTTTTTCATCTGAAATGATTTGGCTAAGCTTGAACAGGATCTTTG | |||||||||
gi|76837123|gb|DV128121.1|DV128121 CV03050A1D09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03050A1D09.f1 5, mRNA se TGTTCATTCCTCTTCCTAAAA EST sequence (targeted fragment marked with yellow): ATTATTNNNATTTTGGGATGAGGAACGAACGAACAACTCTCCTCTTTCTTCTAATTTGATTTCTGTAAATTTTAAAAAAAAAAAAAAAAAAGGATACTTTATGACTATGGCACCCCCAAAACAGGATCAAAATCAAGAAGAAGAAGAAGAAGAAGAGAACAAAGCAGCTTGGCTTCTTGGAATCCAGACTCTCAAGATTCTACCTTACCACCTCCCTCCTCCTGGTCCTCATGATGTTAAAGTTGGGATTAAGGCTCTTGGCATCTGCGGAAGTGATGTTCATCACTTCAAGACAATGAGATGCGCAAATTTTATAGTGAAAAAGCCAATGGTGATAGGGCATGAGTGTGCTGGAATAGTAGAACAAGTAGGCAGTGAAGTCAAGAGTTTAATTGTAGGAGACAGGGTAGCATTAGAGCCTGGAATTAGTTGCCAAAGGTGCAATCTTTGCAAACAAGGTCTCTACAATTTATGCCCTCTTATGAAGTTTTTTGGATCCCCTCCCACTAATGGTGCTCTTGCCAATAAGGTAGTGCATCCTGCTAATTTGTGCTTCAAATTACCCGAAAACGTGAGCTTAGAGGAAGGAGCAATGTGTGAGCCCCTAAGTGTCGGGGTCCATGCTTGTCACCGTGCTAAAATTAGTCCCGACACAACTGTTTTAATTATGGGAGCTGGACCCATTGGACTAGTCACCCTCTTAGCTGCCCGTGCATT | |||||||||
gi|76842795|gb|DV133793.1|DV133793 CV03106B1G10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03106B1G10.f1 5, mRNA se TGTTCATTCCTCTTCCTAAAA EST sequence (targeted fragment marked with yellow): AACACTCTTCATCCTAATCTTTTCTTTCACTACCAACAATATCAGTAATATCTTTCAACATATCATCTTCGCCTATTTTTCTGATTCTCTGTTTTAGGAAGAGGAATGAGCTTTTCATCCGCCATGAAGAGTTCAATACCAACAAGAAAATCAAGAGTCGGGTTTCGATTTCATCCGAGTGATGAAGAATTGATTAATCATTTTCTGATGAGAAAGATACATGGTGATCATGAAGATGAGGATGATGTTGCTATACCTGAAATTAAAGTCTGTGATTATGAACCTTGGGAGCTTCCTGATCTGATCGAGAAAGAATCAAATGGTGAAGCTTGGTTTTTCTTTTCTCCTTGCGATTATAAGTACAAAGCTAGCCTTCGGTTCAACCGGAAAACCAAGGCCGGATTCTGGAAACCCACCGGAAAAACTCGAAAAGTTATAAACCAAAGTAGTAAGGAAGTGATCGGTACTAAGAAGACCCTGGTTTTTTACAAGGAACATCATCTTAAACCCATCAGAACCTGTTTCGTTTTGCACGAATACAGTATAGCTCTAAATTTCAAGGGGAAATCGAAGTTCTGTCTGTATAAATTAAAAGTGAAGGATGAGTCAGATGAAATGGCTTCTTCTTCCCCTTCGGATACTGTGTTTAATTTATCTCGT | |||||||||
gi|76856974|gb|DV147967.1|DV147967 CV03074B1H10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03074B1H10.f1 5, mRNA se TGTTCATTCCTCTTCCTAAAA EST sequence (targeted fragment marked with yellow): GAGGATTTTCTCGTATTCGGATACTCAAAGGCACCGGCTTGGACCAAATTACTTGCAGCTCCCAGCAAATGCTCCTAAANNNTTTTTTNNNAACANNNACCANNAAGGGNANATGAATTTTATGCATAGGGATGAACAGGTCAATTACTTCCCTTCAAGGTTTGACCCGGCTCGTCATGCTGAGCAGTACCCGATTCCTCCAACTATTTGTACTGGGAAG | |||||||||