| mature miRNA: TTTGGATTGAAGGGAGCTCCA species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76854315|gb|DV145308.1|DV145308 CV03139A1A03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03139A1A03.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): ATAATGGCCCAGGTGAAATAAAACAAAACCCAAGCTCCACATATCCTAAACCTATTTGATGTTCTTCTGATCCCTTATTCATCGTATCATCATCGCTGCCCTCATAATCTTCCCCTTCCTATTACGTTTTTTCCAAATCTTAAACTTTAATCGAACTTCAAAACTCTCATTACTCTCTGGAATTTCAATCTCTCTTCTTCCCTATCCCGATTGATACTCTATAATGGATTTTCTCCTTTTAGATTTCTACGGTTTCGGATGGGTGCTTGTTATCGCTCTTTTCTGGCGATCTAAGGGGTACGGTGATTCCGACGGTCACTGAAAAAGACCGAGGACAGCACCGGCCATAGTCCTGAACTCCGGTATCGAGTCCGATCGGACGGAGGGTCTCTGATTGGGGTTTTTAAATGGCGGTCCCGATTCCGACGACGACAGAGGTTAGAATCCAAACCAGTTGCTGTGAAAATAATACAACCAATGAACACTTCAGATGTACTTCTTGAGCACAAGATTAAATTTCAGATGGAAGTTCCCTTCAATCTAGAATTAATCATGCAAATATTGTAAAGTTAGCGGGTGCCTCTGTGGAACCAGCAATGTTTTTTATTACAGAACTTTTGAGAGGAAATACATTACAAAAGTATTTATGGAGCATTCGTCCTAAACTTTTAGATATGAAACTTGCTCTGAGTTTTGCTTTGGACATTTCTCCAGCAATGGACTATTTGCATCAAAATGGGATCATTCATCGAGATTTAAAGCCGAGTAATTCCTGCACTTTTCTTTTCAGTA | |||||||||
gi|76856071|gb|DV147064.1|DV147064 CV03071B1D03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03071B1D03.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): GTATGACATGCTTTTGGAAGAGAGGATAAAGCTAGCAAGAAGCACCGGAACTGCTTCATTCATATTTTTGAGAGATAACTTTTTGGCCAGGCAGTTTTGTTTTGACAAGTTTGGCAGAGTCAGCGGCTATTCCACTTCTTGGAATCCAAATTGAAGAACTAAGTCTGGATGATTAGGCTGAGTTACTTTTTCTGGACCAAAGCTTCACAACTGCAGTTGTACTTGGAGTTATCTAGGTATCACTAATGCCTTCCAACCACTTCCTCAAGATATGTTTTGCTATGGATTGAGGCAAATTCAAAGAGTAAGAATATGTTCTCATGATCATTATGTTCAGCAGCTCAGGAATTAACAGCAGAACAGCTGAAAGATATGCTTCCATCTTGTAATTTAGGACATAAATAATGAAGATTATTGAGATTATGATGGTGAGTGGTCACGTCGAGCAAGAACAAGAACTCCGATTAAGAGAACGGAGGTCCTGATATATATGAGTTCCCTTCAATCCAAATAATTAATTGACCAAAATGGAAAATTTTGAAAATTTTCAATATGGTATTAGTGACGGAATTTCGTCTCAAAAAAAAAAAAAAAAAATG | |||||||||
gi|76853706|gb|DV144699.1|DV144699 CV03137A2C08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03137A2C08.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): GCTTACNTTNNACGAAAATAGTCCTTACAAAATAAGGAAAATAAACAAATAAAAATATCTTAATAAAAGAAGTCTTCCTAAATAAAACAATTAAAGAAAACTAAGGCTAATGGAAATTGCACGATAGTAAATAACAATAGCAAGCTAATTAAACCACATATTCGGTTGTTTGTATTTAAATTCCCTTCAATCCAAATTTTCTACCAAAATTGGCAGAAGACTAGCTTGTCTAAGCCGTGCCTATGCCTTCGTAAATTTCTGAACTTGTTATCAATTTGTCTAAGCCATGACCATGGCTAAGGATCAATTTCTGAAAGTGTAATTAATCTTTCTCCCGTAATTTTAAATGTTCCGATTGACCTCCGTATTCATGTTTCATGCAACTTGAAAAAGATAACAAGGTTAATGAGTCATCAATTCCAGAAGCTTCGTCTTTATCCGCGTTGTCCAACACTTGGACAATGTATGCTTGAAGCTCCTCTTCGAACCTCTTAGCTCTTGCTCGAGTTACCGATCCCTTCGGGATTTGTAATTGAACCACTTGCGTCTCCGAGTCCAGATTTCGACCTTGGTCTCCATCATTCCCCCTCTCCTCAAGAGGATTCGTCCACGAATCAGAACCTGCATCAAATAGAGACAAATCAGAAACATTAAAAGTACCAGAAACTTTATACTCACCTGGAAGATCAATCTTGTAGGCATTATCATTGACACGCTCCAAAACTTGAAATGGCCCGTCACCTCGGGGTTGAAGCTTATTCTTACGAAGCCTAGGAAATCTCTCCTTGCGGAAATGAACC | |||||||||
gi|76854466|gb|DV145459.1|DV145459 CV03139A2F05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03139A2F05.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): CGACAGCAACGGATCTCATCCTTACCATCTTGGCCGCCTCTCCTTACCTCTCTCGTTTTCTTCTCTTCAAACTTTCATTTTTTGCAATTTTCTTCCTAAATTTGTTATCTTCTAATAATGTTTATTCTCTCAAGTTCTCTTTTGATTCGTGCCTCCCATTCTTTCTATGGTCTAATCTGGATAGCAAAATCGTCGGGTTAGATGATTTTATTTCGTTGAGACTCTGAAAATGAAGGGATTTGAGCTTCAACGATCTCGAACGAGACTGTATTTTGATCAACAGGAGGTCAATTTCGGTATGGTCCTGGCCATGAGTTCTGGGTTTCAAACCGTTGGGGATTCCAGGCGGCGATTTCAATCACTACGGCAACAAACGAAAGTATGAAGAAATTTGTGCACCTCAGGTTGAAGAATTTTGCTACATCACTGACAACACTTATTTTAGGGATGAGATGAAGAAACGGCTTGCCACAGATTTTATGGATACAATTCTCTCTATGCTTTCGATCGGCCTCATCGTCACTGCTTCTTTCTTCATGATGCACCAGTACTCGGGAAGCCAACAATTTTTGCTACTGATAATTCAGGATCATTATGTTCAACAGCTCAGGAATTAACAGCAGAACAGCTGAAAGATCTGCTTCCATCTTGTAATTTAGGACATAAATAATGAAGATTATGATGGTGAGTGGTCACGTCGAGCAATAACAAGAACTCCGATTAAGAGAACGGAGGATATATATGAGTTCCTTTCAATCCAAATAATTAATTGACCAAAATGGAAAATTCTGAAAATTTTCAATATGGTATTAGTGAC | |||||||||
gi|76861146|gb|DV152139.1|DV152139 CV03088A1D12.f1 CV03-normalized library Euphorbia esula cDNA clone CV03088A1D12.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): ATTNNNNTTGTTCCAACAGATACTTATTTTAAAAAAAGTGTAACAGAGCTCCATTCAATCCAAAAATAGAGAAAAATAGAATTCTTTCACGTAATACTTATAATGTTCCAACAAATTATTTATTAAAAAATAAAAAATGTGAAAAATAAATTGTTCCACAGAATAATTATATTGTTCCACCAAAATACTTATATTGTTCCACCAAAATACTTTATTGTTCCACCAAATTACTTATATTTTTTTAAAGGTACACGCCCATCAATTTTTTAAATGAATTACAAGTTGGTGTATTTAAGGTAAATGTTCACGTTTTGAAAAATGTATTACAATATTTTGAGTATATGAGAGCTATGCATATAGTCCTAACAAGTATATAAAAAAATAAATAGTATTTTCTAGATTTATTTTTTTTTTAATTTTTCTCTCCCACCATTAAAAAAAAAAAAAAAATGCGT | |||||||||
gi|76846128|gb|DV137122.1|DV137122 CV03116A2C09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03116A2C09.f1 5, mRNA se TTTGGATTGAAGGGAGCTCCA EST sequence (targeted fragment marked with yellow): GACGAACTNTAGCCCTTGTTGTAGATAACGGATCAGGAATGTGCAAAGCCGGTTTCGCTGGAGATGATGCTCCACGTGCCGTCTTTCCATCCATCGTTGGTCGCCCAAGACACACTGGTGTCATGGTCGGTATGGGACAAAAAGACTCCTATGTCGGTGATGAGGCTCAATCCAAACGTGGTATCTTGACCCTCAAATACCCAATTGAACACGGTATTGTTACCAACTGGGATGATATGGAGAAAATCTGGCATCATACCTTCTACAACGAACTCCGTGTTGCTCCTGAGGAACACCCAGTTCTCCTCACTGAGGCTCCATTGAATCCAAAAGCCAATCGTGAAAAGATGACTCAAATCATGTTCGAGACCTTCAACACCCCAGCCATGTATGTTGCTATCCAAGCTGTGTTGTCCCTCTATGCTTCCGGTCGTACCACTGGTATCGTCTTGGATTCTGGTGATGGAGTTTCCCACACTGTCCCAATTTACGAAGGTTATGCTCTCCCTCATGCTATCCTCCGTCTCGATTTAGCTGGTCGTGATTTGACTGACTACTTGATGAAAATCTTAACTGAACGTGGATACTCTTTCACCACCACCGCTGAACGTGAAATCGTCCGTGACATCAAAGAGAAACTCGCATACGTTGCTCTTGACTTCGAACAAGAAATGCAAACTGCTGCTTCTTCCTCCGCTTTGGAGAAATCCTACGAATTACCTGACGGACAAGTCATCACCATCGGTAACGAACGTTTCAGNTGCCCAGAAGCTCTCTTCCAACCATCTTTC | |||||||||