| mature miRNA: TTTGGATTGAAGGGAGCTCTA species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76596888|gb|DV112239.1|DV112239 CV03001X1G07.f1 CV03-normalized library Euphorbia esula cDNA clone CV03001X1G07.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): CGAATTCCATGTGTTGGGTAGAAACTCTCATTTTAAAGCCCTAATGTAGCTAAAGGTCCTACTATTTTAGCTCAGCAAAATGATACTATTGTTGTTGAAGTTACAAACAATTTGCTCACTGAAAATCTTGCTATCCATTGACATGGTATTAGCAGATTGGAATTCCATGGTTTGATGGAACAGAAGGAGTAACTCAGTGCCCTATCTTGCCTGGAGATACGTTTATATTAGTTTGTTGTTGATAGGAGCTGGTGTATACAGACCTGGATTCTGGGGCATGGAACATACTGATCCTTGGTGGATGAAAAGGTTCAAAGGGTCTATAGTTAAAAAATTCCCTTGATTTTAGTTATCATATGTGGGCTCATGATGCCTCTTGTTTTTAGAGGATGAAATGAACTTCATAACAGGTATAAAAGCCAACAAGCAAAACTAAAGCAGAAACAACTTTGGAGAAACAGAGCTTTTATTTATTTATAATTATGTATATGTTGTGAATTAAAGATTCTATTATATCATATAACTCACTTCAATCCAAAAAAAAAAAAAAAAAATGCGT | |||||||||
gi|76861146|gb|DV152139.1|DV152139 CV03088A1D12.f1 CV03-normalized library Euphorbia esula cDNA clone CV03088A1D12.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): ATTNNNNTTGTTCCAACAGATACTTATTTTAAAAAAAGTGTAACAGAGCTCCATTCAATCCAAAAATAGAGAAAAATAGAATTCTTTCACGTAATACTTATAATGTTCCAACAAATTATTTATTAAAAAATAAAAAATGTGAAAAATAAATTGTTCCACAGAATAATTATATTGTTCCACCAAAATACTTATATTGTTCCACCAAAATACTTTATTGTTCCACCAAATTACTTATATTTTTTTAAAGGTACACGCCCATCAATTTTTTAAATGAATTACAAGTTGGTGTATTTAAGGTAAATGTTCACGTTTTGAAAAATGTATTACAATATTTTGAGTATATGAGAGCTATGCATATAGTCCTAACAAGTATATAAAAAAATAAATAGTATTTTCTAGATTTATTTTTTTTTTAATTTTTCTCTCCCACCATTAAAAAAAAAAAAAAAATGCGT | |||||||||
gi|76849697|gb|DV140690.1|DV140690 CV03126A2B12.f1 CV03-normalized library Euphorbia esula cDNA clone CV03126A2B12.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): CCGTTGCTGTCGCTTTAATTTCCCAATTGGGTAACTTTCTGATTCTCCTTAACTTCTGGGTTTATCTAGGGTTTTTCAATTTTCTTGTTTCTTTTTGCTATTTATAGCAATACTTCCTTTTTCTTAAACCTCGGAATAGGAGTTTTTTGGGGTTTAGGGTTTTTTTCAATCCCAAATTCTGAGTTCAAAGTTGTCATCTTTAAGTATTTTTTGGAATTGGGTTTCTGAAATTTGTGTCCTCTGCTTTCTAATTTTAACCCAATTTCCAGAAATGGGAAGTAATTCTTTCTAATTTTAGTGGTTTTATAAGTATCAATTGAGTTCAAAGAAGTCAAACTTCAGTGTTTCTTCAAATTGGGTTTCTTAAAATTATTGGGTTTCCCCCTGTTTTCTATTTATTTTGAGCTCAATTTCCAGAAGTGGGAAGTAAATTTTCCTAATTTAGTCTTCTAAAAGTATCAATTCTGAGTTCAAAGAAGTAAAATTTCAGTGTAAAATTGCTTCCTTTGTTTTAAATTTGAGCTCAATTGTCATAATTGGGACACATTTCCTCTTAATTTGGTTAGTTTGAGCTCTAATTTGAATAGAATTATCTCGAAAAACTTAACAACAATGTCTTCTCCATATTTAAGACATTCATATGGGTTTGATTTAGATATAGTAAAATCACCATCTACTTCAACTAGAACTTCAAACACATCTTCATCAACTCTGTCTGAATCTAGCAACTCCCCTAGAGGTCTCTCCACA | |||||||||
gi|76856071|gb|DV147064.1|DV147064 CV03071B1D03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03071B1D03.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): GTATGACATGCTTTTGGAAGAGAGGATAAAGCTAGCAAGAAGCACCGGAACTGCTTCATTCATATTTTTGAGAGATAACTTTTTGGCCAGGCAGTTTTGTTTTGACAAGTTTGGCAGAGTCAGCGGCTATTCCACTTCTTGGAATCCAAATTGAAGAACTAAGTCTGGATGATTAGGCTGAGTTACTTTTTCTGGACCAAAGCTTCACAACTGCAGTTGTACTTGGAGTTATCTAGGTATCACTAATGCCTTCCAACCACTTCCTCAAGATATGTTTTGCTATGGATTGAGGCAAATTCAAAGAGTAAGAATATGTTCTCATGATCATTATGTTCAGCAGCTCAGGAATTAACAGCAGAACAGCTGAAAGATATGCTTCCATCTTGTAATTTAGGACATAAATAATGAAGATTATTGAGATTATGATGGTGAGTGGTCACGTCGAGCAAGAACAAGAACTCCGATTAAGAGAACGGAGGTCCTGATATATATGAGTTCCCTTCAATCCAAATAATTAATTGACCAAAATGGAAAATTTTGAAAATTTTCAATATGGTATTAGTGACGGAATTTCGTCTCAAAAAAAAAAAAAAAAAATG | |||||||||
gi|76852806|gb|DV143799.1|DV143799 CV03134B2D06.f1 CV03-normalized library Euphorbia esula cDNA clone CV03134B2D06.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): CTCAGANNNNNNATGATATCTATGTGTAATATTTTGTGTTCTCTTATTAAGCTTTTCATTCGGATTGTGACTTTCTCTATTCTTGGTATGATACTCTCGGTAATCTTATCTCGTCTCCTCTGATTTGTTCTCTTATTTAATTTGATTTTGTATTTCTTCTCATATAAAAGGAAAATCATCAATTTGTTCAAATGTTTGTGCAGTAGTTGCAGCTTTATGTGATGATTGTTTGAGGAAATTTCATTTTTGTTGATTAGAAGAAGATTATTAGTTCACGGAAAGTTCAATTTGATGTGAAACTAAACTATGCTTTCATATGCAGAGTTAGAAAAGGGTGCAGATGTGGAGCAGATCAAAGTTGCTTACAGACGATTAGCCAAATTATATAATCTAGATGGTTAGTTTCCCATCTTTTCAAAGTTTTTGAGCTTATACATATCATTATTTCAGCACCATATAACAAAGGATTTCCAGGAACCTTGATCTCGTGCTAATTTAGATGTACGATTATAGTTATACTGCCTAATTTCTTTGTGAATTGTGGTTATGGGGATTTCAGGTTTATAGGTATTTGCTACATCTTCTGTATGTCTTTACTTCTATGCAACCTTTTGCATAATATGGCAATTGGTATTAGTCATTTCTGAGTTTGTGAGAAAGGAGAATGTGCAATGTAGTTTTGATAATTATTACCAGATTCTCTCCTATTATGAGTGTTTCAAAATGAAGTTGTAGGTTGTATCATTAGAGCTTCATTCAATCCATTTTTTTTTTAATTTTTTTAATTTA | |||||||||
gi|76849967|gb|DV140960.1|DV140960 CV03127A1B10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03127A1B10.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): ATTTGGATTTTATGACACATAATTGAAAATGACAATTTTGGTTTGACATTTCCACTTGTAGCAAATGTTGTTGTCTTCTTCAAGATCTTTGAATAAATGTCTTTATATTAAGCTCATGCTACTATCTTATTAACTTTTTCTTTTTTCGTGGGGTTAATATTTGTTTTCACTTTCTCCCTGCTTATGTTTCTATTTCTGGGTATTTCATTTTCATTTTCATTGAGCTAAGCTACTCTTTTGGATGATGCATCATCTAAGGTAGACTGACTTATTCATGGTTGCTCATGCTCGTAGTTAGTTTGATGAGATAGGCTACTTGACCGCATTGCTTGGATCAGAGGTTTGTATACTATTAGGCATTGTTCTTTTTCTTGACCATCATAATTCTCTTTGAGATTTTTTTTGCCACTCATGTAAGAGTAATTTGCACACCGAAATATGTTGGTTTTTTATATTGCCAGGTGGTGAGTTTTACAAGAGTACTTTGTGCAGTTGTGTTCATTGTAATTATGCCTTGCGCTTATTCAAAAGGTCTAGTTCGATAGCTAATGAATTGGTTAATATAGTGAAGCCAGAGGAACTTCTTCTTGACTCTGGCTATTTGAAAATTTCAGATTTTGGGTTGAGTGCATTGTCATCGCAAACAAGTGCGGATATATGGTTTCAAATGTCCAGAAAATTGTTGGGCGAAAGCTAGAACCAGAGAGTAACGAACTTCTAGCATCAATTGCGAACACGCAGTATGTTGTCACCTTAGATGGTTTACATACAAGGCTCCATTCAATCCAAATTTATATAGTTTTTATTCT | |||||||||
gi|76854466|gb|DV145459.1|DV145459 CV03139A2F05.f1 CV03-normalized library Euphorbia esula cDNA clone CV03139A2F05.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): CGACAGCAACGGATCTCATCCTTACCATCTTGGCCGCCTCTCCTTACCTCTCTCGTTTTCTTCTCTTCAAACTTTCATTTTTTGCAATTTTCTTCCTAAATTTGTTATCTTCTAATAATGTTTATTCTCTCAAGTTCTCTTTTGATTCGTGCCTCCCATTCTTTCTATGGTCTAATCTGGATAGCAAAATCGTCGGGTTAGATGATTTTATTTCGTTGAGACTCTGAAAATGAAGGGATTTGAGCTTCAACGATCTCGAACGAGACTGTATTTTGATCAACAGGAGGTCAATTTCGGTATGGTCCTGGCCATGAGTTCTGGGTTTCAAACCGTTGGGGATTCCAGGCGGCGATTTCAATCACTACGGCAACAAACGAAAGTATGAAGAAATTTGTGCACCTCAGGTTGAAGAATTTTGCTACATCACTGACAACACTTATTTTAGGGATGAGATGAAGAAACGGCTTGCCACAGATTTTATGGATACAATTCTCTCTATGCTTTCGATCGGCCTCATCGTCACTGCTTCTTTCTTCATGATGCACCAGTACTCGGGAAGCCAACAATTTTTGCTACTGATAATTCAGGATCATTATGTTCAACAGCTCAGGAATTAACAGCAGAACAGCTGAAAGATCTGCTTCCATCTTGTAATTTAGGACATAAATAATGAAGATTATGATGGTGAGTGGTCACGTCGAGCAATAACAAGAACTCCGATTAAGAGAACGGAGGATATATATGAGTTCCTTTCAATCCAAATAATTAATTGACCAAAATGGAAAATTCTGAAAATTTTCAATATGGTATTAGTGAC | |||||||||
gi|76857177|gb|DV148170.1|DV148170 CV03075A2E08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03075A2E08.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): TCGAAGGTTAGTGGTTGGAAACGTGCATGTTCTGTTCAACCCAAAACGTGGAGATATCAAACTGGGCCAGGTCCGCTTATTTCTTGAGAGAGCTTATGAGTTATCACGAGAATGGGGCAGTATCCCTGTTATTATTGGTGGAGATCTTAACAGCCTTCCACAGGTGAGATCTAGTTTTGAACTTAATTGGAAATTATAAATCAAGCATATGTCACATCATTTTACTCTCAAAAAGTAGCCTTGTAACATCAGTTTTGTTTTATCTTATGTTTAGAGTGCTATTTATCAGTTTTTGGCTTCATCAAAGGTGCGTTTTGGTATTCTAAACTGTCCCAACCTTATATAGTTCCCTTCAATTCAGTACATTACCCTAATATTCCCCTCCTTTTTCCCTTTTGTCTTGTTTGGTGTTATCTTTGAAGTTGGACATCCTGGGACATGACCGGAGAAACATGTCTGGGCAGCTAGAACATCAACCCCGTCACAAATACTTCAAATCTCATTACAGTAATGGAAAAAGGAATTGTATATCCATCTCAAGGCAATCAACACCTGTATGGAGTGATGAAGAAGTGACGCTTGCTACGGGTAGCAAAGGACTCACTCATCTTTGTCACCAATTAAACCTCAGTAGCGCTTATCTTGGGTTCCTGGGAGTGGTAGATCCCGAGACAGCTGTGGAGAACCATTGGCAACT | |||||||||
gi|76843267|gb|DV134261.1|DV134261 CV03108A1C01.f1 CV03-normalized library Euphorbia esula cDNA clone CV03108A1C01.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): CGACAGNNNNNNTTTTAATTCCCCTCTCTCTTTCTCTCTCTAGTTTCTCTCTCCTCTTTCTGATAAAATTTTCCAACTCTCTGTTCATGAAAATCTCTTTAATTTCCCAATTGGGTAACTTTCTGATTCTCCTTAACTTCTGGGTTTATCTAGGGTTTTTCAATTTTCTTGTTTCTTTTTGCTATTTATAGCAATACTTCCTTTTTCTTAAACCTCGGAATAGGAGTTTTTTTGGGGTTTAGGGTTTTTTTCAATCCCAAATTCTGAGTTCAAAGTTGTCATCTTTAAGTATTTTTTGGAATTGGGTTTCTGAAATTTGTGTCCTCTGCTTTCTAATTTTAACCCAATTTCCAGAAATGGGAAGTAATTCTTTCTAATTTTAGTGGTTTTATAAGTATCAATTGAGTTCAAAGAAGTCAAACTTCAGTGTTTCTTCAAATTGGGTTTCTTAAAATTGAATTGGGTTTCCCCCTGTTTTCTATTTATTTTGAGCTCAATTTCCAGAAGTGGGAAGTAAATTTTCCTAATTTAGTCTTCTAAAAGTATCAATTCTGAGTTCAAAGAAGTAAAATTTCAGTGTAAAATTGCTTCCTTTGTTTTAAATTTGAGCTCAATTGTCATAATTGGGACACAATTCCTCTTAATTTGGTTAGTTTGAGCTCTAATTTGAATAGAATTATCTCGAAAAACTTAACAACAATGTCTTCTCCATATTTAAGACATTCATATGGGTTTGATTTAGATATAGTAAAATCACCATCTAC | |||||||||
gi|76853706|gb|DV144699.1|DV144699 CV03137A2C08.f1 CV03-normalized library Euphorbia esula cDNA clone CV03137A2C08.f1 5, mRNA se TTTGGATTGAAGGGAGCTCTA EST sequence (targeted fragment marked with yellow): GCTTACNTTNNACGAAAATAGTCCTTACAAAATAAGGAAAATAAACAAATAAAAATATCTTAATAAAAGAAGTCTTCCTAAATAAAACAATTAAAGAAAACTAAGGCTAATGGAAATTGCACGATAGTAAATAACAATAGCAAGCTAATTAAACCACATATTCGGTTGTTTGTATTTAAATTCCCTTCAATCCAAATTTTCTACCAAAATTGGCAGAAGACTAGCTTGTCTAAGCCGTGCCTATGCCTTCGTAAATTTCTGAACTTGTTATCAATTTGTCTAAGCCATGACCATGGCTAAGGATCAATTTCTGAAAGTGTAATTAATCTTTCTCCCGTAATTTTAAATGTTCCGATTGACCTCCGTATTCATGTTTCATGCAACTTGAAAAAGATAACAAGGTTAATGAGTCATCAATTCCAGAAGCTTCGTCTTTATCCGCGTTGTCCAACACTTGGACAATGTATGCTTGAAGCTCCTCTTCGAACCTCTTAGCTCTTGCTCGAGTTACCGATCCCTTCGGGATTTGTAATTGAACCACTTGCGTCTCCGAGTCCAGATTTCGACCTTGGTCTCCATCATTCCCCCTCTCCTCAAGAGGATTCGTCCACGAATCAGAACCTGCATCAAATAGAGACAAATCAGAAACATTAAAAGTACCAGAAACTTTATACTCACCTGGAAGATCAATCTTGTAGGCATTATCATTGACACGCTCCAAAACTTGAAATGGCCCGTCACCTCGGGGTTGAAGCTTATTCTTACGAAGCCTAGGAAATCTCTCCTTGCGGAAATGAACC | |||||||||