| mature miRNA: GTTGAAGGAGATGGAGGACGA species: Fagus sylvatica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|299867063|gb|FR598000.1|FR598000 FR598000 WZOAFSCA Fagus sylvatica cDNA clone WZ0AFSCA15YL19NM1, mRNA sequence GTTGAAGGAGATGGAGGACGA EST sequence (targeted fragment marked with yellow): GCTAAACACCCATTCATTAGTTATACCTAAAACAAATAAAAGTCCAAGTCTGTAACTTGGTTAGAAAAGCATCAAGACATAAAAGAATAGAAAAAATTCAACAGCACAATTATGTATCCTACTATCCTCTAAACAAATTTACATTTAGCACACTTCTTCATGTGACACTCTTCAAATTTATCATATAACCAGAAGCTGAGAATATCCCAATGAAGGATAAGGAGATAACGGCGATAACGGAGGCACACTGAAAATTCCCTTCCCATCAAAATCCCATACCCCAGTCCAACTTGACGGCGTTAATGGAACACTCTCAGCCAATGTTACCTCCTCCTTCATCTCCTTCATCTCCTTCCTCTCTTCACTCTCACTCTCACACTCTCTCTTTCTTTTCATACCAACACTCACTTCAGCATCACCATCACCATCAACTTCCAAAGAAGAATTCCCGACCTCTTGAGGAAAATTCAATATAGCTTTACTTCCACGCAATCTGAACGCAGCTCTGTCATAAGCTTTAGCAGCTTCTATGGCAGTCTCGAAGGTTCCAAGCCATACCCTTGAGCCTTTCCTATTCGGGTCACGTATTTCAGCTGCGAATTTCCCCCATGGCCTTCTGCGAACACCCCTATAATGCTTACTTTCATTACTAGAATATTCAGAAACATTGAGATTACTTGTAGTAGTTGGCTGCAACATGGGCAGCTGTGAATTCAGGCCAAGTGTTGTTGCTTGAGGAATTGCAACGT | |||||||||
gi|299871046|gb|FR606309.1|FR606309 FR606309 WZOAFSCA Fagus sylvatica cDNA clone WZ0AFSCA30YN17NM1, mRNA sequence GTTGAAGGAGATGGAGG-ACGA EST sequence (targeted fragment marked with yellow): CTATAGATAAGGTATGTAACTATGGGAAGTTTAATACTTACATCACAAGCAAATGACTCAGGAAAAGAAAAGGACATTAAAGATCAAATGATCTCAAATTTAAGATAGGGAATTGTCAAGCTTTGAAGCAAACTTCTCCATCACAAACCCATCCTGGATTTTCATCCAAGGCACACTTTGGATGAAGATCAAATTCACACTCATCACAGTAATATGACCAGACATGTCCCTCCTCATCGCACCCATCACATTGAAAAATATTACGGCGAGCAAGCACAAGCTCGTGCTCCTCATGGAGTTTGTGTTTCAACTTCTCAGGCCACCCCTTTGCCATCTCCTTGAATTGTGCCTCAATCTCCTTCAACCGCTCATCAGTAAAAGGATAAGCATCAGCCCCATGAAGCATTATGAGATCTCTAGCTTCTTTCGTGACGGTCCTGCCACTTGGTCCAATGGCTACAACCATGGGAATGCCATTGACCTTGAAAGTACGACTCAAGGATGCCTTCCTTGTGTCGCCAAAGGGAAGCGCTAGCCATGGCATTCCTGAAAAAAATTCATCAAAGGACTCTTGGTCCGTGTCACTAGAGATGTAAATCACTTCAAAAGCATCATCCTTTGCCTTGATCTTGTGGTATGCATCCATAAGTTTTGGTAGAAAGGCACGGCATGGAGGGCACCAATGTGCTGAGAAGTAAAGGAGGATGTTTTTTCCCACTAAATCTGACACTGGAACCTTGACTCCATTTTTCCCAATGA | |||||||||
gi|299870268|gb|FR614588.1|FR614588 FR614588 WZOAFSCA Fagus sylvatica cDNA clone WZ0AFSCA9YM03NM1, mRNA sequence GTTGAAGGAGATGGAGGACGA EST sequence (targeted fragment marked with yellow): CCTCAATTTTTTCAACTTTTATTTTTCTTTTGTTATTTTCATACATATTTGAAGCATACATGAGACATTCAGTCTCCCCTCTAATGCAAGCCTAAATAACACCAGAATAACCCCACCCACAAAATACGGTGAAACCATCCAGCGCTAATATTTTGAGGAGTAAAAATGACCATTGCCAACAAACACCGATCGTGCATCTGTCTCCTCCCTGTTTGCAGTAGCAGCTGCAGTGGCAGGATCTTGAACAGCGCCCATTTCCTTCTCGACCTTGGCTTGCATTTCGCGGAGAGCGGCGGCTTCCTCTTCCATCTCCTTTAACCGCTTCTTCATCTCGTCCAGCTCCTTGACGGCGTCATCGTCGGCGGCGGACATGTCAACGTCGGCATGGTGAGAGTCCATGTCTGCCTCCAACTCTCCCTCGTCTGGGATTTCTCCTCCGTACACCTCGTGCTCCTCTTCCTCCATCACTATCTCTATCTCTCTCTCTCTGGGATTTCTACTTTCTAGAAAGAGCTCCTTTAACTGAGTGACAGCCAAGGTCCA | |||||||||
gi|299862952|gb|FR611298.1|FR611298 FR611298 WZOAFSCA Fagus sylvatica cDNA clone WZ0AFSCA3YM15NM1, mRNA sequence GTTGAAGGAGATGGAGGACGA EST sequence (targeted fragment marked with yellow): CCTCATTTTTTCACTTTTATTTTTCTTTTGTTATTTTCATACATATTTGAAGCATACATGAGACATTCAGTCTCCCCTCTAATGCAAGCCTAAATAACACCAGAATAACCCCACCCACAAAATACGGTGAAACCATCCAGCGCTAATATTTTGAGGAGTAAAAATGACCATTGCCAACAAACACCGATCGTGCATCTGTCTCCTCCCTGTTTGCAGTAGCAGCTGCAGTGGCAGGGTCTTGAACAGCGCCCATTTCCTTCTCGACCTTGGCTTGCATTTCGCGGAGAGCGGCGGCTTCCTCTTCCATCTCCTTTAACCGCTTCTTCATCTCGTCCAGCTCCTTGACAGCGTCATCGTCGGCGGCGGACATGTCAACGTCGGCATGGTGAGAATCCATGTCTGCCTCCAACTCTCCCTCGTCGGGGATTTCTCCTCCGTACACCTCGTGCTCCTCTTCCTCCATCTCTCTCTGGGATTTCTACTTTCTAGAAAGAGCACCTTTTAACTGAGTGACAGCCAAGGTCCA | |||||||||
gi|305422724|gb|FR620081.1|FR620081 FR620081 WZOAFSAA Fagus sylvatica cDNA clone WZ0AFSAA37YL05FM1, mRNA sequence GTTGAAGGAGATGGAGGACGA EST sequence (targeted fragment marked with yellow): CGTCTTTCTAATCTCACTTCTCTCTCTCTTTCTCTTTCTCTTTCAACAACCTCAGATCTCTCTCTCTCTCTCTCTCAATGGCCTCCGTTACAGGAACTTCGATTTCCATGGTTTCCTTCAAGGCCAGCCTGGCACCAAGCAACAAGATCTCTAATCTGAAATCAGTTTCCTTTCCTATTAATGGGAAAAGCTTCACAACTCTTAGGATGCAGCCAGCACGTTTCCGTGTTTCTTGTGCGGCTAAACCAGAGACAGTGACGAAGGTGTGCGAAATAGTGAAGAAGCAGCTGGCTCTACCTGACGACTCTGCAGTCAGTGGAGAGTCAAAGTTTGCTGCCCTTGGAGCTGATTCTCTCGACACGGTTGAGATTGTGATGGGACTTGAGGAGGAGTTCGGAATCAGTGTGGAAGAAGAAAGTGCACAGAGCATTGCCACTGTTCAAGATGCAGCAGATCTGATTGAGAAGCTCATTGAGAAGAAGGGTGCTTAAAATAGTTTGTGAGAATGTCAGGCATACTTCTATATTAGACTTTTTCTAGAGTTCTATGTTTTAAGCAGTTTTTAGTGACTTTCAGTTTGCGTGTCGCTCGTTGAGCTTGTTGAGCTTGTAACGTTCTTGACGAACTCACTTGGGGCTCATATGTCCCTCACTTTTTTT | |||||||||