| mature miRNA: TTTTGGGACAGAGAGAGTATA species: Fagus sylvatica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|299864814|gb|FR596595.1|FR596595 FR596595 WZOAFSCA Fagus sylvatica cDNA clone WZ0AFSCA13YA10FM1, mRNA sequence TTTTGGGACAGAGAGAGTATA EST sequence (targeted fragment marked with yellow): CTGGACCTTGGCTGTCACTCAGTTGATATCTTCTTCTGTCCCAAAATATCTTTCCCAAAAAACACTCTGAGTGTATGCACGGTCCATAATATCAGATCTGGTGGATGCAGTACCTAAATGGCTATCAGTTTGTGGTTAGAGACCTGAATGATGTCAATGTCAAAACAGTTGCTGCTGGCAAAGGTCTATTTCTTTGTTGGCTCTGAGTTTACCTGCAAATAATTCTCAAGAAAAACATGGATCAGATACGGAACACAATTATGCAGCATGAAGCGTTATTCAAGGAACAGGTTCAGACTCTGCACAAGCTGTACAACATCCAAAAATCGGCAATGCAAGAAATAAGAAGAATTTACTCTCAGGCCCTTGCTTGTAGTTCTAAAGGTTTTGTACTTGTAGATGATAAATATGGTGGTTCTGTTTTGGATGGGAAACATCTGTTGCCAGCCTATGCTACTGGTGAAGCTTATAAGGATGAGTCACTAAATCTTTCCCTGCACCCTTTCTATGCATTAGATCATAAAGGATGTGGTTCAGAATGGATGGATAGCAGAGGGGTTGAAACTCTCCAAACTGCTCAAAGCAAACCTATCAGAAATTTTGATCTGGAAAGACTCCCAGAGGAGTATA | |||||||||
gi|305424233|gb|FR622197.1|FR622197 FR622197 WZOAFSAA Fagus sylvatica cDNA clone WZ0AFSAA47YE19FM1, mRNA sequence TTTTGGGACAGAGAGAGTATA EST sequence (targeted fragment marked with yellow): GTGACTAGTCAATTATGGTCGTTATGCATGCAAACGGGCACTCATAGATAAACTCATATATGTTTGGTTTATAAATTTAGAAGGATACACATATTATAGCCACACCCCTTGTCTATATCAATATTTCTTTTCCCAACAGCTTGCGTTTCTTTGTTTCTTTCATGATTGTGTCTGTAATCACAAATCTTAAATAAATACTCCCTCTGTCCCAAATTGTTAGTCCTCTATTTCATTTTGGGATGTCCAAAATGTAGTCCTCTTTGAAAAGTCAATAAATACATTTCTCAACTTATCCTTTGTTTTATTTTTATTTTTTAGAAAATTTGTATCTTTTTATGTAAAAGACAATACATTAAATGATGTTCCCCTAAAAAGTTGGATTTTCTAAACAGAACTAACAATTTAGTCTCATGCAATAGTAAAAAAGTATTGTTGTAGCAATACTTTTTAATCTCGACCGTCCAATGAAGAATAACTTTTCATCTCAGTTGTCCAACGAAAACTAATGGAAAAGTAACTTTTAAATATTTAAAAAAAATCTTTACTGTTATTTGAACGGACGACCGAGATGAAAACATCCGACATGTTTAAGATGTGCAAGCTAGATCAACAAGTGCACATCAAGCCCTAAAAGTAT | |||||||||
gi|305421521|gb|FR617479.1|FR617479 FR617479 WZOAFSAA Fagus sylvatica cDNA clone WZ0AFSAA23YM09FM1, mRNA sequence TTTTGGGACAGAGAGAGTATA EST sequence (targeted fragment marked with yellow): CCAATTGCTCCAAACGTCAGCTAAGCCACGCTTCAGGGATGAGATCTCAATGCAAAGTTAGGTATAGTCTATACATTATACAAATACTGCTTTAACGTTTCTTGAACCACATTCTCAAACTATCTCTTTCTTCCACTGTACAACATATAAATTCCCTCTCTCCCAAAACTTTTTATATATATAGCTTCTTTGCGCGGTGCACACTTCATAAACTCTCTTTCTCTTCACAAAATTCTGTATCTTTCGGTAAAGTCCTCGACTTTTCAGCTATTTTTCACTGATTTGGTGTTATTAAAGTTTGAATTTTTGGGCACCCAATAGAAAGAGAAGGGAAAAGCTCAAATGGGTTCTCAGGTATTGGTGGCACTTGCACTCTCACTGCTTGGTGGACTCAGTACTTCTATAGGTGCACTTTTTGTAGTTCTCAATCCGGCTCCCAATTTGAAGATGCTTGGGCTTTTACAGGGATTTGCTGCAGGTCTGATGCTGAGCATTTCATTCCTTGATTTGGCTCACAACGCTATCAACTCTATTGGCTTCTTAAAAGGCAACCTTTGGTTTTTTGCAGGTGTCATATTTTTTGCTTTTGTTGCCAATTTTATTCCAGAACCAACACTTGCCCCTGTTCCAGATGTG | |||||||||
gi|305423226|gb|FR621974.1|FR621974 FR621974 WZOAFSAA Fagus sylvatica cDNA clone WZ0AFSAA46YE02FM1, mRNA sequence TTTTGGGACAGAGAGAGTATA EST sequence (targeted fragment marked with yellow): CAACATATAAATTCCCTCTCTCCCAAAACTTTTTATATATATAGCTTCTTTGCGCGGTGCACACTTCATAAACTCTCTTTCTCTTCACAAAATTCTGTATCTTTCGGTAAAGTCCTCGACTTTTCAGCTATTTTTCACTGATTTGGTGTTATTAAAGTTTGAATTTTTGGGCACCCAATAGAAAGAGAAGGGAAAAGCTCAAATGGGTTCTCAGGTATTGGTGGCACTTGCACTCTCACTGCTTGGTGGACTCAGTACTTCTATAGGTGCACTTTTTGTAGTTCTCAATCCGGCTCCCAATTTGAAGATGCTTGGGCTTTTACAGGGATTTGCTGCAGGTCTGATGCTGAGCATTTCATTCCTTGATTTGGCTCACAACGCTATCAACTCTATTGGCTTCTTAAAAGGCAACCTTTGGTTTTTTGCAGGTGTCATATTTTTTGCTTTTGTTGCCAATTTTATTCCAGAACCAACACTTGCCCCTGTTCCAGATGTGAAAAGGAAAAAGAAAAATGGAGATGAAGGGGGCAAGGACATTATGAAAAAGCATCGCCGCCAAGTTTTATTCAGTGGGATTGTTACAGCAATAGGCATAAGCTTGCACAATTTTCCTGAAGGAATGGCAGTTTTCC | |||||||||
gi|305423361|gb|FR617730.1|FR617730 FR617730 WZOAFSAA Fagus sylvatica cDNA clone WZ0AFSAA25YD06FM1, mRNA sequence TTTTGGGACAGAGAGAGTATA EST sequence (targeted fragment marked with yellow): CCAACTTTTTTGTACAAAGTTGTCCCCCACTTAGCGAAAACAAAGATATTCTCTTTCTGTCTCAGAGCAAAAAAAAAAAAACAAACAGAATTACAGACATAGATTTCGCTCCCAAACCAGCGCCGCCAATAGCAGCTCGGCACGTGGAAGGTACCGGCGAGAGTCGAGACCATGGCTATAGCGGATCACCGCCATCACCACCACAACCACCTCCACAAATCAAACTCGGACGTGAAGCTCTTCAGGCTCTGCCCGTTTTGGCAATCGAGTAATACGTCGTCGTCTTCGTCGTCTACGCAGAATCTTACTCATAGTAGCATCGGGAACCTGAGCAACCGACACGTGGAGGTCTCGTCTAATCCGAAGCCATCACCTCCCAAAACGGTGTCGTCCGTTGCGCGATCGTTACTCCCTCCTCGGCGGAGGCTCCGCCTTGACCCTGCCAACAGCCTCTACTTCCCAAATGAGCCTGGTAAACAGGTTAAGAGCGCGGTCAGGTTGAAGAACACTAGCAGATCTCATGTGGCTTTTAAGTTTCAAACTACAGCACCGAAGAGCTGTTATATGCGTCC | |||||||||