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mature miRNA: ACGAGCTCATGGTCGAGTGTT
species: Festuca arundinacea
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|257183977|gb|GT038591.1|GT038591 CLS_cLiFproots_26a1_1_m01cLibkit5LD_G01 CLS_cLiFproots_plant Festuca arundinacea cDNA clone

ACGAGCTCATGGTCGAGTGTT
|||||||||||.|.|.||.|
GGCTCGAGTACCGGTTTACGA

EST sequence (targeted fragment marked with yellow):
CACGCTGAGGCAAACCTAGTTGCAGACTTGCAGTTTACCTGTGTGGTCCGTCTGCAACCAGCCAGCATTCCGAAGCAATGAGTTTCCCGGCGAAGAAGACCAGCAGCGAAGCAACACAGCTGAAGTCGTCGTCTTCAGAAGAGCAGCAGGCAAAGGTAAATGAGGTGCGGGGTCTCCTCGGCCCACTGATGGAGGAGATGCCGAGCTTCCTGTCAGACACAACCATCCTCCGTTTCCTCCGAGTGAGGAACTGGAGCACGGAACAAGCGACCAAGGGTCTCAAGGAAACTGTCAAGTGGAGGCGCGAGTACAGGCCGGAAGCAATTTCCTGGGAAGACATTGCAGAAAACGAGGTCGAGGCCAAGAGAACGCATATAGCCAACTACGTTGACAAGAATGGAAGAAGCGTCCTCATATCAAACATGGGTATAAAGTCTAAAGTTTCTATGAAGGACCAGATAAAGCACATGGTATATCTCTTAGAGCATTTGGCCATGAGCTCGGCAGATGAAAAAGATGACTGTGTTGTTTGGATAACTGACGTCCGTGGCTGGTCAATAGCAAGTACGCCATTCTCCTCGTCCCGTG