| mature miRNA: CAGAAGAATCTGAAGCTGGAA species: Festuca arundinacea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74458072|gb|DT714247.1|DT714247 s13dFA46D10SD090_508664 Tall fescue, Festuca arundinacea Schreb, young seedlings Festuca arun CAGAAGAATCTGAAGCTGGAA EST sequence (targeted fragment marked with yellow): GGCACGAGGCTCTTGCAGATACTAACTCAAAAGTGATGAATTGCAATATGGAGGCGGTGTTGTGTAGCTGAACCTTACCAACCGAGACAGGCTTACCCTTTACCCACTCATAATCATCATTTGATGCATGCCTTAACCGTTTTCTCAATGAAAAGTTTAGGGAAATTCCTCTTTCTCCTAGATTCTTAGGTGATGAGTTCTAATCAACATGTTACTGGGTTTTAATATGTTTAGAGAGCTTCTTAATATACTATCTTTTCAGTTCATCATAACATAGATAACTTATCTTACATGAGGTAATATTCTAAATTCAGATTGTTCTGCGAAGGTTCACGAATCTAAGGATAATCTGGAGCTTAAAACGATTGGCACATCCTACAACTGATTAAGACTTCATATCTTACACTCCTCATTTCAAGCCTATAACTTACTCTTCTGTCTTTATGTTATTTAACTGCTTGTCCATCTATATCTTTGACCTAAGTTTTGCTTCTACCCTTCCTATGGTTCCAGATTTATTTTCGTTGAGGCCATGCTGGTAGTGACTGGAAATCTATTATATCGTTTGGTTTGCAATCTATCATCCATCTTCTGTTAGATTCATTTTCTTTTTTTCCATGTGCTTTTG | |||||||||
gi|257177539|gb|GT043034.1|GT043034 CLS_cLiFproots_3a1_1_e15cLibkit5LD_C08 CLS_cLiFproots_plant Festuca arundinacea cDNA clone 3 CAGAAGAATCTGAAGCTGGAA EST sequence (targeted fragment marked with yellow): TAACTGCTGGTTCATCTCCAGGGTATGTTATTGATGTAATGCAAGCTGGTGGTAGGATGCATGCTACCTTCGTCAATATGCCACCCTTTCAAAACAATCCAGTTCAAAACATGGAAGCATAAAGTCCCCCACGAACCGGCCTCAACTAGAGAAACTTAGCCCAGTCTCTTCTACATCGTCATGGCTGCATCATGTTGTGGATCTTTATCCTCCTGGATCAAGCAACAGGGATTGGACTTGCGCATACTGTAAAATTATTCAGCCACCTCGTACCAGACACTGCCATGATTGTGATAAGTGTGTCCTTCAGTTTGATCATCACTGTGTTTGGCTTGGAACATGCATTGGCAAAAATAACCATTGTCGGTTTTGGTGGTACATATTTCAAGAAACAATACTGTGTACCTGGACTGTTGCTCTGTACATTGAGTCACTGCATTTAGATATTGATGACAAGGCCTGGTGGAAGGATTTTATTGGTGTAATCATGTTAGCAGTATTGATATTTATCCTACTTTTTCTGCTGCTTCTGTTGATGTTTCATAGCTATATTGCTCTTACAAATCAAACTACCTATGAAGTTGCCAGAAGGAAGCGGATATTCTACTTGAGGGGAATTCCTGACAGAGTTCATCCATTCAGTAAAGGCATCTGTAGAAACATCTATGACTTCTGCTTCTCTAGACAGAATGGATTTGTTCTGGAAGCTGTGCCCCCGCTGGAGGAGCTGGAAGCCAGAGCTGTTCCTTACACATGCCGAGACATAATTTGCTGCCGGTGTTGTTGATATTTGTTGTACTGTACCATTCTTTACCCACTAGCATGTGCTGCAATCCAGTTTCAGATTTTTTTCGTCAATGGAAGCTGGACTTTCATGAGCTGCACCAGTAGATATGTCTCGAGTTCATTTTCATGTAAAAGCACATGTTCATTTTTACGCCAAAAAGAAGTGTATGTGTTGCCCAAGATGTTGATGTCTGTCTATCCCCTTTGTATACCAATATATGTCT | |||||||||
gi|74429209|gb|DT685384.1|DT685384 s13dFA12H12FS104_519916 Tall fescue, Festuca arundinacea Schreb, Field Stress Festuca arundin CAGAAGAATCTGAAGCTGGAA EST sequence (targeted fragment marked with yellow): GGCACGAGGGCGCTTTTGACAATGCGAAGCACCGGACTTACGTTGATCTTAAGGACAAATGGAAGACGCTGGTGCACACGGCGAGCATCTCGCCCCAGCAGCGGCGCGGTGAGCCAGTGCCACAGGACCTACTGGACCGGGTCCTGGCCGCCCAGTCGTATTGGTCCCAGCAGCAGGCCAAGCTCCAGCCTAAGACACCCCCTCTGACTGAGGCTCGGCTGCTCACCTAATGTTCTCAGCTAATGGGAAACCATTCCAGCATTTGTATAAAGTCAGTCAGTCAGTCAGCCCATTCAAAGGAAGGAGGTCAAGGAAGATAGTAGAAAAAATATATACTACATAAAAAACAAGGTACAAGAAGCATTGACCGCATTGTTGTAATATCTACTCACCAACAGCTATTCTTTTAAGCCAGGGTTCTCTCTCCTTGTGAATTTAACCAAAGGAAAGGGTAATTTCTTTGGCAAATTGTACATGATGATGATGATGATGGAAGAAGATGATGATGATCCATGAACACTGAGATCTGCAGCTAGCGACTTACTACTAACTCAAACAACTGTTTGTGCTAAAAAAGAGAAGAAGAGAGTGAAAGCTTCAGATTCTTTTGTTCAATTCAATTCATT | |||||||||
gi|74457994|gb|DT714169.1|DT714169 s13dFA45E11SD087_508508 Tall fescue, Festuca arundinacea Schreb, young seedlings Festuca arun CAGAAGAATCTGAAGCTGGAA EST sequence (targeted fragment marked with yellow): GGCCGAGGGCGGGATGTTAAACTTCGCGCTTTTGACAATGCGAAGCACCGGACTTACGTTGATCTTAAGGACAAATGGAAGACGCTGGTGCACACGGCGAGCATCTCGCCCCAGCAGCGGCGCGGTGAGCCAGTGCCACAGGACCTACTGGACCGGGTCCTGGCCGCCCAGTCGTATTGGTCCCAGCAGCAGGCCAAGCTCCAGCCTAAGACACCCCCTCTGACTGAGGCTCGGCTGCTCACCTAATGTTCTCAGCTAATGGGAAACCATTCCAGCATTTGTATAAAGTCAGTCAGTCAGTCAGCCCATTCAAAGGAAGGAGGTCAAGGAAGATAGTAGAAAAAATATATACTACATAAAAAACAAGGTACAAGAAGCATTGACCGCATTGTTGTAATATCTACTCACCAACAGCTATTCTTTTAAGCCAGGGTTCTCTCTCCTTGTGAATTTAACCAAAGGAAAGGGTAATTTCTTTGGCAAATTGTACATGATGATGATGATGATGGAAGAAGAAGATGATGATCCATGAACACTGAGATCTGCAGCTAGCGACTACTACTAACTCAAACAACTGTTTGTGCTAAAAAAGAGAAGAAGAGAGTGAAAGCTTCAGATTCTTTTGTTCAATTCAATTCATTCTTTTG | |||||||||