| mature miRNA: GATGTTGGCATGGTTCAATCA species: Festuca arundinacea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|257178611|gb|GT039066.1|GT039066 CLS_cLiFproots_27a3_1_f13cLibkit5LD_C07 CLS_cLiFproots_plant Festuca arundinacea cDNA clone GATGTTGGCATGGTTCAATCA EST sequence (targeted fragment marked with yellow): ATAGTGTGCCTAGGGAACTCCCTAAGATACCATCATTTCGTACTGGCGCGAGGCGTGATCATCATTTGGATGAATCTGATACAAGAAAGAAAGTGATAATTGACAACCTTGGGACACTTGATTGCGTCTCATATATTGCTGCCATGATTGAACATGCTAACATTGCATCAATTTGGCCTTGTTGATTGTCCTGATATTGACAAAAATTGTTGGACTATTGATGCTGTACTCAAAGGAGCTTTTGTCATCAGTCCTCCAGTCCATTGTCCCTTTCGGGATATTGAGACTAGGACGAAACTTCTTTTGCCCTCACGTCTATTCGGAGGTGTGATATTGACAACTTCTCATGGGATGTTAGACCATAAACAATCTCCACTAAAACGTGCTGGGGGCAAAGTTCTCGGATTTTTCTTTTATTCTAAAAACAAATATGATCACATGAAAAACATTCAGATCACCTATTGAACACTTGCAAATTGACAGCCTCGAAACTAGCAGAAAATTTTCCTAGTTTTCTTTCTTGTTTTTTGGATTTTGAACTCATTTTTGTTGTTTGTTATTGTTTGATTACCACTCTGATCAACCCACTAAAAAAAATTCAATAAAAAGACACAATCACTCGAAAAACAATGATGCGAAAAGCTGTCACAAAAATCATGGATGCATGCACCGAAGGAGAGAAGCTGATGACTTCTAACGAATTTCTTGATTTTAGAAGGAAAACTAAGATTCAAACCTTTTGTGGACAAGTTGGTTGACAGGCATTGGCATGTGGCTCCAGCTCCCAAAATCATAACATGTACATATCCAGAAAGCTGTTACATGTACGGAACAAAATTCTCTTTTGCAGACTATTGCTGTCCGCTCATCAGGCATTGGCTCCCTGAAAACTAAAAAAGAAACCAGAAATTGGTTTCATAAGCCTTGGGGCAAAATCCCAGGGTGCCTGAAACTCAATTAATCAGGGAACTTTCTGGAAAAACATGAACCAAATTGGG | |||||||||
gi|257185134|gb|GT046980.1|GT046980 CLS_cLiFproots_65a3_1_b23cLibkit5LD_A12 CLS_cLiFproots_plant Festuca arundinacea cDNA clone GATGTTGGCATGGTTCAATCA EST sequence (targeted fragment marked with yellow): AGAGGAGATGGTTCGGCTTCATCTGTGAAGCTAGCAACGGAGGTATGTCACTGGTATGATTTTCAGCAGCAAATTATGCATTTACTTTACAAGATGCAGGGCGTTATTTGTTTTCACAAATGAGGTATATGTCTCTTGTGTCCACTCTCATGTCATATACCTCATCCCACCCCAGTGTATAAAAGCCAGACTCCTCTTCTTGTTCCCTTTGATCAAAGCTTCCTACTTGTGCAGAAAAACTCTCCACGATGGCCTCCTCCGTGTGCAACTCAGGGGCGAACAATTTTCGTGGGTTGTCGGGGAAAGCCTCACCTTTTTTTGGCCAGCACTCCTCCCCGGCGATCTCTTTGGCAGATTTCTCCGGCGGATTTGATGGAGACATGTATTCCCAATTACTGAGTACAAGTTTGCCATTGACTGAATATGTGAAGCTGATTACGAAAACAACGACTGTATCGCCTCCGGGATATCCAAATCATCGGCGCCTTGTTCTGACTGATGATATCAAACGGCTGATGAGACGTGAGCTACCGTTAATGCCAGAACCTGAGACTAATAGCATATGCTTCTTCAAGATGAAGACTAACAATGTTTTTGTCCACCTGCTGTCCGGAAAACCTTATCGCCATGCCGCATCCTGGACAGCAGATTACGATGGCAATCTTGAGCGAATGAACTATGCCAACGTCGGGGAAATGTTCAGACAGACAATTGTCAGTGGATGATGGCTACTTTGCCTGCTGATTTCCGGCCA | |||||||||
gi|74446216|gb|DT702391.1|DT702391 s13dFA31B12RT101_84523 Tall fescue, Festuca arundinacea Schreb, roots Festuca arundinacea cDN GATGTTGGCATGGTTCAATCA EST sequence (targeted fragment marked with yellow): GGCACGAGGGAAGGGGAGAGCGCGGGAAGAGGGGCGGGGCGGCAGTAGCGGCCTCCTCTTCTAGCTCAACCGCAACCCTGAGCGTGGCGGCGGCCTCCTGTGCGGCGACGACGACCTCTTGTGTGGTGCCTTCTCATTGGCCCGGCGGCCAGGTGCAGCGGCTTGAGAGAATCATGCCACCATCTTGCAGCTGCGAAAATATATCCTGGAAATCGACCTCTCCGTGGACACCTGGAAACCAATTTGTGATCCATCAGTTCTGAGATGTATGAGCTGGAACTATTTTTGTCTCTTTGATCAGTTCTAACTTCTGATCGGCTGTATTCATCCAAGGTTTCGGCCTCCATCTCCTCTACGGTTCCAGATCTCCCTGCATTGCTACTCTTACAGGTTGTTACCATGATGCAATCCAGATTCCTGCCAAGATCATATTGGATGCTATGTTAACCCAGGTGAATCATTCAAAGGCTACCTACTATGTTTACACAGGCCATGATAGTGTTATGTATGTCTATCGAATTTTGCAATTCTGTTGGTCAACATAAGACTTCAGATGGCAAGACATCGATATCAAGTTACATGTTGCTCCAACTACCTATTTGAAAAATGTGATGAATTATTTTTC | |||||||||