| mature miRNA: TGGAGAAGCAGGGCACTTGCT species: Festuca arundinacea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|257182397|gb|GT044478.1|GT044478 CLS_cLiFproots_55a3_1_l17cLibkit5LD_F09 CLS_cLiFproots_plant Festuca arundinacea cDNA clone TGGAGAAGCAGGGCACTTGCT EST sequence (targeted fragment marked with yellow): AGAAACCCTTGTATTCTATCAAGGAAGAGCCCCTAAGGGGAAGAAGACTGAGTGGGTCATGCACGAATTCCGCAAGGAAGGGCAAGGCGATCCGATGAAGTTACCATTCAAGGAGGACTGGGTATTGTGCAGGGTTTTCTACAAGACAAGGGCAACCATTGCCAAGCCACCCACAGGCAACAGCTACAACATGGACAGTGCTGCCGCAACCTCACTGCCTCCCCTCATCGACAACAACTACATTGCATTTGACCATCAAACTGGGATGCAAAACCTTGAGGGTTATGAGCAGGTGCCCTGCTTCTCCAATAATCCCTCCTCCCACCCGCCATCGTCAGCGTCGATGAACATTCCAGCCACGGCGCCCATGATGGCTGATCATCAGGAGCATCAGCACATGGGGAAGGCAATCAAGGATGCGCTGAGCCAGCTCACCAGGTTTGAACAAGGCAACGTGAAGAGGGAGGCGCCTGCCCAGGGTGGTGTGTTTGCTCAGGATGGGTTCGAGTACTTAGCTGAGAGTGGCTTCTCACAGATGTGGAACTCACTCAATTGATTTTCTAGCTAGGTGTATTATTGCTGCCAATCAAGGATGGATATAAATCTAAAAGGAAGATCTAGACTTGGGTGTGTGTGCCTATGCGCTATTGCATGTAGTTGTGGTATATATATAGCATTATAGCTTGCGTCATTGTAGTTCACATTAATTATTTGGCAAAAAAAAGTGTGATCAAAGAAGACACGTATATATCATTGATGATGTAAATGTATATATGTATATTATTTTTGTACGACTATGGGTGAGATGGAAAGATCAGTGCTTGCTAGCTAAAAACTATATATAATGGTGAAAAAAAAAAAAAAAAAAA | |||||||||
gi|257178813|gb|GT039268.1|GT039268 CLS_cLiFproots_28a1_1_k01cLibkit5LD_F01 CLS_cLiFproots_plant Festuca arundinacea cDNA clone TGGAGAAGCAGGGCACTTGCT EST sequence (targeted fragment marked with yellow): AGAAGCCAACAACTTCCCTCATTCTTCTCCTTCCTCAGCAGGGGCAGGGGAGATCCGGAGATGGCGGGTGATGAGAAGGGAAGGTGCGTCAAGTGCAGGGAGTGGCAGGAGCACTACTTCTGGGAGCACATGGATTTGAGCAACATCAGGTTCTTCAAGCTCATGATTGGAGATTTTCAGCATCGCGTTAGCATTCCAGAGAAGGTTGCCAACAATTTCACCAGGCTTATGGCCAAGGAAGGATTCACCCTCAAATCACCTAGCGGCGAGACATGGTGCGTCGCCGCTGAAAAGATTGCCGATGAGCTGTTCTTTGTGTCAGGATGGGAGGAATTTGTCAAGGATCATGAACTGCAGGAGAATGACCTCCTGCTCTTCGAATGCAGTGGCATTGGCTGCTTTGATGTACGCATCTTTGACTCGAGCGGCTCTGAGAAAGCGTCCTGTTTCTTCACCGATAAAAAGGGCACCAACATGCACAGACACTTTGACAACATTATGGGTCAGCAAGCTGAAGGACACTGTCTTTTGAGCGATTCCAACAATGCCATTGTGCCGCTCTCGCAGCGGGTTGGGTCTCCTCACAAGGCCTCTACTTCAAAGAAACCGATAAAAGAAGCTGAATCTCCAAACAACAGCAACTATCAAGATAAGTGTGTGGTGGACGATGAAGAAGAGGAAAGTGACAATGAACACACTTACTCCAACTACTCCTACTCAAGGCTTGCAAGTCACCTAACTGCGGACGAACGAGAGCAAATATTCGGGTTGGCATCAATTCAACCACGCAATCCTGTTTTTGTGGTGGTCCTGCAGAAGTCCCATGTTCGTGGGGCGAAAACCATCCTGATCATCCCCAGCAAGTTTGCAGCTGAACATCTTGGGGGAAAATCACACGAGGTGCTGCTTTTGAGGCCAACAGCAAAGAGCAGTGGCATGTCAATTACTACCACGCAAGCCTCACCCGAGGCTTCAACGGCGGACGCTGGGTCAAATTTGTCCGCGAAAACAGTCTGTGCGAGGGCTATGTCTGCATC | |||||||||
gi|74444814|gb|DT700989.1|DT700989 s13dFA08H02RT026_72085 Tall fescue, Festuca arundinacea Schreb, roots Festuca arundinacea cDN TGGAGAAGCAGGGCACTTGCT EST sequence (targeted fragment marked with yellow): GGCACGAGGCTGTGGTTGCCTCAGTGGGTGGCAAGGAGTGGTATTTCTTCAGCCCTGAAGGACNCGGAAATACGCGACGGGGCAGCGCACAAACCGAGCGACCATATCAGGGTATTGGAAGGCGACGGGTAAGGACAGGGTGGTGGCACGTAGGGGTGCGTTGGTGGGAATGAGGAAGACGCTTGTGTTCTACCAGGGGAGGGCCCCTAAGGGACGAAAGACGGAGTGGGTGATGCACGAGTACAGGTTGGAGGGTGCACATGAACAAGCCTCCAAGTTCAACTCCAAGCAGGAGGATTGGGTCCTGTGCAGGGTCATCTGCAAGAAGAAATCAGGAGTTGGTGCCACCCCCAAGCCAAGGAGCCTCGCCACCATTGGCCATGGCATATGCACAGACACCTCCTCACCGCCATTGCCACCTCTCATGGATACCACCCTAGCACAGCTCCATGCCACCATGAACTCCACCTCTGCCGCCACTGCACTTGAGCAAGTGCCCTGCTTCTCCAGCTTCAATAATAACAGTGCCAGCAACAACAGCAGCTACC | |||||||||
gi|74450994|gb|DT707169.1|DT707169 s13dFA11E02ST007_111430 Tall fescue, Festuca arundinacea Schreb, stems Festuca arundinacea cD TGGAGAAGCAGGGCACTTGCT EST sequence (targeted fragment marked with yellow): GCACGAGGAAACGTCAAGGAGGAGAACCCAATCCCAGTAGTAATTTCTGAAGGACGAGGAGAACAGAGCTCAACAAATGGCGAACAACAGTAAGTCCCCTGCTTCTTCTCGGCAGATTCCGTATGTATACTGGCATTATTGGGGGATCTGATGCTTTTTTGTAAAAAGAATTCTGATGCAAAATTAGTGTAGGAATCGAATTTTGCCACCATCTAGGACCAGGTGGTCCAATTTGATTTGGTATGCCAGACGCTTGAGTGAGTCGCTTATGGTTGTTGGGAGGGACCTCGTGGGCCAGACGAAAGAGCCATCAACCATCCAGCTGCAATTGCCATTTCCGTGGTCGGTGATAGGAGGAAGAAAAATACGAAATACTAGCTGTTTACATTTGTCCTAGACCAACACCTCACGCAAAGGGAACCCACCACTTCGGAAGCTTCTAGGATTTGACCAGTTGACCCGTTTGCAATATCAAGCCCATGTGTAGTTGTGGAGTCCTATGCGCTCTTTAGTTTTTAGCACTGAAAATTAGTTGGGAAGAGTGTAGTGTTCACACAGGATTCCTACACTACTTAAAATAGTACATAGATACCTGAAATCAGGTTACCCAAACTGCATCACGTT | |||||||||