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mature miRNA: TGACAATGAGAGAGAGAACGG
species: Festuca pratensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|237615950|gb|GO890033.1|GO890033 RDD_cLiFpEfI12nb_19x1_3_B09_cLibkit5_A05 RDD_cLiFpEfI12nb_plant Festuca pratensis cDNA clone

TGACAATGAGAGAGAGAACGG
|||| |||||| ||||||| |
ACTGGTACTCTATCTCTTGGC

EST sequence (targeted fragment marked with yellow):
ACTCACTCATGGAATGAAGGCATTAGTGGGTAGTGCTTCCAACTGAAGGAAACGCCATGGGTTTCTTACCACTGGTTCTGGTTCATATCCTTGTCAGCTTTGCCGCTTGTGCTGAGGCCATAAGGAGAGCAGACTTCCCTCCCGGTTTTACCTTCGGCACAGCTTCTTCAGCTTACCAGTACGAGGGCGCTGTCAATGAGGGTCAACGCGGGCCTACAATATGGGATACTCTCGCGAAACGACCTGGGCGGGTGATAGATTTCAGCAATGCAGATGTTGCTGTTGACCACTACCATCGTTACAAGGAAGATGTGGACTTGATGAAGGATATTGGCGTGGATGCATACCGGTTCTCTATCTCATGGTCACGCATCTTCCCAAATGGAACAGGCAAACCTAATGAAGAAGGATTGAGTTACTATAACAGCCTCATAGATGTTCTATTAGATAAAGGTATCCAACCATATGTAACACTCTTCCACTGGGACCTTCCGCAAGCACTGGAAGACAAATACGGTGGCTGGTTAAACTCGCAAATTGTGGAGGATTTTGTTCACTATGCATCTACTTGCTTCCAGGAATTCGGAGATAGAGTGAAGCACTGGATAACTGTTAATGAGCCCCATAACTTTACAATTGATGGTTACGATTTTGGCATCCAAGCACCTGGGAGGTGCTCCATTTTGTCTCATTTGTTCTGTAAGGATGGTAAATCATCAACCGAACCATATATTGTAGCCCACAACATACTCTTGGCTCATGCTGGTGTTTTTCATACTTACAAGCAATATTTTAAGAAAAAACAAGGAG