| mature miRNA: AGTTTGCCGGAGCTGGAGGAT species: Fragaria vesca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|89549481|gb|DY671279.1|DY671279 STRC713JX cold-stressed Fragaria vesca seedlings cDNA library Fragaria vesca cDNA clone STRC7 AGTTTGCCGGAGCTGGAGGAT EST sequence (targeted fragment marked with yellow): CTTATCCTTTGGCTCCGGCAAACGGTTACACAAGGAGCGATGGAGAGTCTTTGTCCGAGGACGAGGTCAAGCGCAAGAAGAGAATCAAGTGCTTTGCTTATATTGGTATTTTCATTG | |||||||||
gi|158371891|gb|EX680276.1|EX680276 JS5CJ11JG Draught stressed Fragaria vesca (strain Hawaii-4) cDNA library Fragaria vesca cDNA AGTTTGCCGGAGCTGGAGGAT EST sequence (targeted fragment marked with yellow): AGTTTAAGAGAAAACAAACCCACAAAAGCAGAGTAAAACATACTATACTCTTGATTTCTTCATTCTTTTCTTCATTTCATTTCATATCAGAAAGAAAGACAGAGATGGCTGACAAGCACCAACAAGTTTATCCTTTGGCTCCGTCAAACGGTTACACAAGAAGCGATGGAGAGTCTTTGTCCGAGGACGAGCTCAAGCGCAAGAAGAGAATCAAGTGCTTTGCTTATATTGGTATTTTCATTGTGTTCCAGATGGCCGTCGGGGCTGTGTTTGGTCTCACTGTGCTCAAAGTGAAGACCCCCAAGGTGAGACTCGACACAACAAGCACCCTCTCAGGCGTCACCTCTTCCACTACATCGTTCAGCTCAACCTTCAACACCCAAATCAGGGTCAAGAACACCAACTGGGGTCCTTACAAGTTCGACGAAGGGGTCGTGACATTCAAGTACCAAGGTACACCTGTTGGGACATTCACTGTACCAAAGGGCAAGGCCGGGATGCGTGGCACCAAGAAGATCGATGCGAGTGTGAGCTTGAACACCGCTGCATTGAACAGCTCTGGCGAGTTGACGCTGACCAGCGAAGCGAAGTTAACCGGGAAGGTGACGTTGATGTTCATCATGAAGAAGAAGAAGTCTGCGAGTATGAACTGCACCATTCAAATTGATGTGTCTGGACAGACAGTCAAGAGTGTAGTATGCAAGTGAAACCAGTCTTAGATTGTTTTCATTGCCCTTGTTTTATACTTTTTACGATTTTTTTTCTTTTTGCTGTTCTTCGTTTATGTGATCGACCTGCGGGAGCATACATATACTTACCAAAGCACAATTTTTTGTA | |||||||||
gi|158376382|gb|EX684767.1|EX684767 JS7BJ05JG Salt and heat stressed Fragaria vesca (strain Hawaii-4) cDNA library Fragaria vesc AGTTTGCCGGAGCTGGAGGAT EST sequence (targeted fragment marked with yellow): GTTCCTTCATTTCCTATAGTTCCATCATCATCACAAAACAAACCCACAACACTACTTCTGCCTTCATTTCCTTTTCGTTTGCATCAGAAAATTAAGCAAAACAAACATGGCTGAGAAGACACACCAGGCTTATCCTTTGGCTCCGGCAAACGGTTACACAAGGAGCGATGGAGAGTCTTTGTCCGAGGACGAGGTCAAGCGCAAGAAGAGAATCAAGTGCTTTGCTTATATTGGTATTTTCATTGTGTTCCAGATGGCCGTCGGGGCTGTGTTTGGTCTCACTGTGCTCAAAGTGAAGACCCCCAAGGTGAGACTCGACACAACAAGCACCCTCTCAGGCGTCACCTCTTCCACTACATCGTTCAGCTCAACCTTCAACACCCAAATCAGGGTCAAGAACACCAACTGGGGTCCTTACAAGTTCGACGAAGGGGTCGTGACATTCAAGTACCAAGGTACACCTGTTGGGACATTCACTGTACCAAAGGGCAAGGCCGGGATGCGTGGCACCAAGAAGATCGATGCGAGTGTGAGCTTGAACACCGCTGCATTGAACAGCTCTGGCGAGTTGACGCTGACCAGCGAAGCGAAGTTAACCGGGAAGGTGACGTTGATGGGGATGATGAAGAAGAAGAAGTCTGCGAGTATGAACTGCACCATTCAAATTGATGTGTCTGGACCGACAGTCAAGAGTGTAGTATGCAAGTGATATACTAAAAAACAGAGACACGCTATAGCTCTGTATACGGATTTTTTATTATATTTTTTCTTGTATTTGATTTGTTGTGGATATATAAATGGTATTTAT | |||||||||
gi|238017777|gb|GH203147.1|GH203147 MAN-VES-009_E05_T7_T01270 Suppression subtractive hybridization library SD Fragaria vesca cD AGTTTGCCGGAGCTGGAGGAT EST sequence (targeted fragment marked with yellow): CGGCCGCGGGAATTCGATTACCTTGAAAGCTATGCATGTGTGGAACTATGGAGTTTTCCATGCTAAGGGAAATATAAACCAAAAATTTTCTTTGGATCGCTCTGACAGTATTGTATGTTGCCGACATTAGTGACCAAAATCTTCACCTCCGGCAAACTTAGGATGTAAGTTTATGAGTTGAGTAGAGGTGCTTTGATTTTGATGGTGATGCTTGTATTATGCTTTGCAAGGACGAAATCAGCATGTA | |||||||||
gi|238016763|gb|GH202133.1|GH202133 MAN-BAR-011_C12_T7_T01273 Suppression subtractive hybridization library EB Fragaria vesca cD AGTTTGCCGGAGCTGGAGGAT EST sequence (targeted fragment marked with yellow): TACCAATGTGTCGCTCACAATCACATGTAAGTTGAGCAATTTCTTTCTTGGGAAAATTCTCCTCAAAAGCAGCCATAATAGCAATTGTAGAAGCACAAACTAATGCAGCAGAGCTTGATAGTCCAGACCCTGTAGGAACTGTTCCATCAATAAGAACATCAAGTCCCACTGGTGCACCCAAATCTATTCCTCGAGATCTGGCAAACTCATAGAAACCTTTGTA | |||||||||