| mature miRNA: CTTGTTGCCGGGAACGGCGTC species: Fragaria x ananassa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|260660024|gb|GT151877.1|GT151877 M214D04R Fragaria x ananassa var. Carisma green fruit achenes UMA library M2 Fragaria x anan CTTGTTGCCGGGAACGGCGTC EST sequence (targeted fragment marked with yellow): ATTGCAGCAAGGAAGAGAAATCGAACAGAACATGATTAACCCAACTATAGATCCTGAACAACGATTTGAGCAATGCCAGCAGACCTGTCAATCTAGGCAACACGGGGGCCAGCAGCAACAACAATGCCGTCAACAGTGCGCACAACAATTGAGCCATTACGAGCGTCAGCAGATATGCCAGCACCGTTGCCAGAGGCAACAAGGTGGGGATTGGCAACAACAACAGCAGTGCCAAAGAAGGTGCGAGCAACAACTACAACAAGGAGAAGAATACGTAGACTTGTACTCAAGAGATCCCGAGCAAGGATTTGAGCAATGCCAGCAAAGGTGCCAATCCCGGCAACAAGGCCAACAACAATGCCGTCAACAATGCGCACGACAGATGTGCCAGCACCGCTTGCCAAAGCCACAAAGGTGGGGGATTGGCAACAACACCAGCAATTGCCAAAGAAGGNGCCGANCCACAATTTCCACCAAGGGAGAACTTTGAANNTGGACTTTTNTTTCAANAAATNCCCAACCANAAAATT | |||||||||
gi|285809123|gb|GW402655.1|GW402655 C202C09R Fragaria x ananassa var. Chandler sustractive red fruit UCO library C2 Fragaria x a CTTGTTGCCGGGAACGGCGTC EST sequence (targeted fragment marked with yellow): GCAACAACTNTGCCAAGCAAGGTGCCAGCAGCAATTGCAGCAAGGAAGAGAAATCGAACAGAACATGATTAACCCAACTATAGATCCTGAACAACGATTTGAGCAATGCCAGCAGACCTGTCAATCTAGGCAACGCGGGGGCCAGCAGCAACAACAATGCCGTCAACAGTGCGCACAACAATTGAGCCATTACGAGCGTCAGCAGATATGCCAGCACCGTTGCCAGAGGCAACAAGGTGGGGATTGGCAACAACAACAGCAGTGCCAAAGAAGGTGCGAGCAACAACTACAACAAGGAGAAGAATACGTAGACTTGTACTCAAGAGATCCCGAGCAAGGATTTGAGCAATGCCAGCAAAGGTGCCAATCCCGGCAACAAGGCCAACAACAATGCCGTCAACAATGTGCACGACAGATGTGCCAGCAGCGCTGCCAGAGGCAACAAGGTGGGGATTGGCAACAACAGCAGCAATGCCAAAGAAGGTGCGAGCAACAATTACAACAAGGAGAACTAGACATGGACTTGTATTCAAGAGATCCCGAGCAGAAATTTGAGCAATGCCAACAAAGCTGCCAATCCAGGCAACAAGGACGAGGCCAACAACAACAATGTCGTCAACAATGTGCACAACAATTGAGCCAACAGGAGCGTCAGCAGGTGTGCCAGCAACGTTGCCAGAGACAACANGGGGGGGATTGGCAACACACACATGCCAAGAANGTGCGTGCACACTACACAGGAGATGATACATGNCTGTNTTCAGAATNCTGACAGGATTGAGCATGCAGCACG | |||||||||
gi|260658218|gb|GT150847.1|GT150847 M201H12R Fragaria x ananassa var. Carisma green fruit achenes UMA library M2 Fragaria x anan CTTGTTGCCGGGAACGGCGTC EST sequence (targeted fragment marked with yellow): GTGGGGATTGGCAACAACAACAGCAGTGCCAAAGAAGGTGCGAGCAACAACTACAACAAGGAGAAGAATACGTAGACTTGTACTCAAGAGATCCCGAGAAAGGATTTGAGCAATGCCAGCAAAGGTGCCAGTCCCGGCAACAAGGCCAACAACAATGCCGTCAACAATGCGCACGACAGATGTGCCAGCAGCGCTGCCAGAGGCAACAAGGTGGGGATTGGCAACAAAAGCAGCAATGCCAAAGAAGGTGCGAGCAACAATTACAACAAGGAGAACTANACATGGACTTGTATTCAAGAGATCCCGAGCAGAAATTTGAACAATGCCAACAAAGCTGCCAATCCAGGCAACAAGGACGAGGCCAACAACAACAATGTCGTNAACAATGTGGACAACAATTGAGCCAACAGGAGCGTCAGCAGGTGTGCCAACAACCGTTGNCAGANACAACAAGGTGGGGATTGGCAACAACAACAACAATGCCAAAGAAGGGGCGTGCACAACTGCAANAAGGAGATGAATACATGGACCTTGTATTCAAAAAGATCCCGGAGCAANGATTTGNCCATTGGCCACCAAAGGNGCCATTCCCGACACCAAGGCAACAACATT | |||||||||