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mature miRNA: AAGCTCAGGAGGGATAGCGCC
species: Glycine max
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|208061578|gb|GD860482.1|GD860482 454GmaGlobSeed603131 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA

AAGCTCAGGAGGGATAGCGCC
||||| |||||||| ||.||
TTCGATTCCTCCCTCCCGTGG

EST sequence (targeted fragment marked with yellow):
AGCGTGAATAGCACTATTTTCAATCNCCTATAGAAAGTTACTGGGAAATTCGGAAATGTTAGGTATCTATTATATAGGAGCTGGGTGCTCTTTAGCGGTTAAAAAAAAAAAGTAGTAATAGGGGCGTTATAATCTCAGGTGCCCTCCCTCCTTAGCTTGCTTGTTGAAATTTAAGGTGAAATCATACAAAAACCCTT



gi|208274103|gb|GE073279.1|GE073279 454GmaGlobSeed815927 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA

AAGCTCAGGAGGGATAGCGCC
|||||||||||.|||| ||||
TTCGAGTCCTCTCTATGGCGG

EST sequence (targeted fragment marked with yellow):
CGGCCGGGGGTTCAAGCTGAGCTGAAATTAATCTGAAGAAACGCTCCTCAGCTCAACCATTCTTAGGGTTTTCATCATGTCCTGTTTGTTGCAGGAAATGACCTTGGTGCTCTTTGTCATGACCCCTCAAGGTGAAGGCCACAAAATTCAAAATGAAAGGAAAGTGTGGTAGGATGTTATGGCGGTATCTCTCCTGAGCTTATTCTTCTAATGTTTTTGTTTTATTTTTTTATTTATT