| mature miRNA: CTCGAGCCAGACAACATTCCT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|298171309|gb|HO016341.1|HO016341 ocpsga0_0100_B09.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGGGGTGGGTAGAGTGACGGAAGCAGAAACCAAACACAACTCAATCGCGAAATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCGGCCTTCGGCGGAGGCGGCGCTCCGCCTCGGCCATCGAGTGTCGGCGGCGGAGCACAGGGTTCCGGCGCTGGCAAGGATCGGAAGATGGCGTCGGCGGAGCAGCTCGTGCTGGAACTCAGCAACCCTGAGCTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCATTGCTATGGAATTCTTTTGGTACAATTGCTGCACTTTTGCAGGTATGTTATCTGGCTTGAGTTACATATTCCTTGCCTGTATTGTTTACCATACTTTGCTTTAATCTTTCTTGTTAATTTTTACTTGGTTTGTAAAATTTTGAGCTTATACATTTTCCTTTTCTCCGTATGCTTTTATTACCTATCATTCCATTATGATCAGTTATATCTTTTGATAAGTTGATGTCTTTACTTGCTTCCAACTTTTTTCCTTTGCAATACCAACTTTTTATAGTCATAAAAAACTGATGGGATGGTGATTGGGTGA | |||||||||
gi|193356583|gb|FK321868.1|FK321868 454GmaGlobSeed56500 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGAGGTAGGAAGGGAGAATAGGCCATGGCTTTGAAGAGTGAGGTTCGTGTGAAAAGGGTGTTAGGTATGTGTCTGGTTCGAGTTCTGATTTTTCTTTTTCTTCTGAAGGAGAAGAATAAGAGGGTTTGTGGGTGAAGTAGAGGGAGAGATAGAGGGAGTTGAGGACGAAGAGGAACAAGAGGGTTCGAATAAGCAACGTGGTTCTTTGTTCATGGTTTCTTCTTCTTCTCACTCACTCCACT | |||||||||
gi|207748979|gb|GD719528.1|GD719528 454GmaGlobSeed462177 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): CATCCAGATCCTTCCCTCGATATGGAAGGCCAAGGACCAGGAACACGAAGAGGGGATTGAAGAAACGAAGCGGAACTAACCGAGCTTGAAGAAAATGGAGAGACCGAAGCATGTGTCCTTAAGCGGCGAGTTCTCGTCCTTGCTGAGGAACAGGAAGTTCTCTGGCTTGAGATCCCTGTGCATCACTCCCATGGTGTGGCAATCGTGGACCACCGTCACAATCTGGCGGCACAGGTTGGCGGCGGCATGCG | |||||||||
gi|298193783|gb|HO040431.1|HO040431 ocpsga0_0416_A04.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGGGAGAGTGAGAGAGGGGACAAACCGCAAAACGTTGAGATGGGTTAGTAGAGGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAAATTGTGTTTTTGTGTTACGGGGGCTTCATTTCTTCTTGGATTTGTGTTCATCAAGTGCCAAAGGTTGTGTTGTGTTGGGTTTTCATGTTGGAGGCTACATATGCATTATTATGTGTGTATATGTTTGGTTACAAGTGTGTAAGCTAGCCCTGCAAATGTTAGGTTAAGAGGAATGTTGTCTGGCTCGAGGTCATGAAGATATACATATGAAAGTGTTAACTTTTCAGTTAATTTCTAGGATAAATTAATGGAAATTAATTTATACCCTAAATGATTCTCGGACCAGGCTTCATTCCCCCCAGCCAACATTTGCTACTCAATATATATACAGCTACTTAATTTGCGTTTAATTTATGAAGA | |||||||||
gi|208165836|gb|GD963740.1|GD963740 454GmaGlobSeed706389 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GTAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGGAGGAGTAGAGTACTGAGATCAGTGAAAGTTTCCAATGGAAATTTACCCCTCTTACACAAAAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAACTTTTGCTTTTTCCTTAATTTAAATTTCTTTCTCTCCATTTTCATATCTCGCATGCCCTTATGGTAAGGCTTTCTCTTCCTTTCATCTTTCTCTCAATCTGCTC | |||||||||
gi|298187649|gb|HO034798.1|HO034798 ocpsga0_0341_E03.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGGGGGTTGTGTTGAGATGGGTTGGTATTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAAGGGGGTTCACAGTGGATGGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAAGTACTTCCTTCATTTGTTTATACTTCAAACTTCAAACCACAAGATCATAGGTGTAGCTACGTACCTAGCTAGCTTCTCTCTTTATTTTGAAGGATCTCTCTACACACACATGTCATGTGTGTGGTTGAGAACTTGAGATGTTTCCTTGCAAAGGTGAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAAGAGGAGAGTACTGAGATCAGTGAAAGTTTCCAATGGAAATTTACCCTCTTAACACACACACAGAAAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAACTTTTGTTTTCTATTCCTTTCAGTTTCTTTCTCTCCATTTTCATATCTTTCTTGCATGCCCTTATGGTAAGGCTTTCTCTTCCTTTCATCTTTCT | |||||||||
gi|298173207|gb|HO020191.1|HO020191 ocpsga0_0150_E02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGGGGAAGAGTGTTGTGTTGAGATGGGTTGGTATTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAATGAGGTTCACAGTGGATGGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAAGTTCTTCCTTTCATTTGTTTCTACTTCAAACTTCAAACACAAGATCATGTGTGTTGTGTGTGGTTGAGAACTTGACATGCTTCTTCTTCCTAGCTTGCAAAGGTGAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGGAGGAGTAGAGTACTGAGATCAGTGAAAGTTTCCAATGGAAATTTACCCTCTTACACAAAAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAACTTTTGCTTTTTCCTTAATTTAAATTTCTTTCTCTTCTATTATTATTTTGTGTCTGATGTGTGTGTTTTAGTGTAATGTATTTATGGAGCTTCTAAAGTTGTTGAAAATGCAGAAACCAACTCAGGAAAAGCTTGGATCAGCAATATCAGCTTCATATGCTACCTTTTCGTG | |||||||||
gi|298183245|gb|HO028458.1|HO028458 ocpsga0_0256_E08.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GGGGGAGTGAGATGGGTTAGTAGTAGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTTCTCAAAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAAGCTCGCGTTTTTTGGGGGGCTTCATATCTTCTTGGATTTGTGTTCATCAAGTGCCAAAGGTGGTGTTGTGTTATATATATGCATTATTATGTGTATATGTTTGGTTACAAGTGTGTAAGTTAGCCCTGCAAAGGTTATGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGATATGGAGATATATATGAAAGTGTTTCAGTTAAATTCCAGGGTATATAAATTAATGGAAATTAATTTATACCCTAAATGATTCTCGGACCAGGCTTCATTCCCCCCAGCCAACATTTGCTACTACTCAATACAACTACTTAATTTGCGTTTGTTTTATGAAGATCCTCATCTTCATAGGATTGTTTTGCATCTTGCTATCAGATACCACCGAAGAAGGCTTTTTGATTTAC | |||||||||
gi|208295678|gb|GE091801.1|GE091801 454GmaGlobSeed834449 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): ATAATCTACATTGTCTTCTAAATTGATTGTGGGAGACTTGAATCATGGAGATGATGTTGTCTGGCTCGGGAGGAATCAGTGAAGGATAAATCAGTTCTGCATCCCATCCGTCTACTTCACCCATCTTTAGTATGAATAGCAGTATTGTGAATTTGTATGTGGTTTGCAATATGTTGTTATTACCTTTGCTCATTCAAAAGCTGGGATGAACAGAAGGTTTAGAGGGAAAATGACTTTGCATA | |||||||||
gi|207833195|gb|GD801834.1|GD801834 454GmaGlobSeed544483 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA CTCGAGCCAGACAACATTCCT EST sequence (targeted fragment marked with yellow): GACTTCCTCTCAAAAAATACATAAGAACAAATCCAAGTGATTCTAAGTCGTCCCTACGGCTTTGCTCAATTCCAAGATGAGTATTCATACTAGCATATCTAGCAGTTCCAGTCAAATTCTTATTCTCTCTGTAAGGAATATGTTGATGGGTAGAGGTGTCTCTGTGCTTCTTAGCAAGACCAAAGTCAATGGCATAAACTTGATTTGCACGCCTCCCCAAACCCATTAGGAAGTTGTCTGGCTTGATGTCCCTA | |||||||||